RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 LLPHQ9BRT6 129 aaKnown RBP10.84□□□□□ -0.67
ABCA1-204ENST00000494467 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
ABCA1-204ENST00000494467 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
ABCA1-204ENST00000494467 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
ABCA1-204ENST00000494467 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
ABCA1-204ENST00000494467 TTLL1O95922 423 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 SNHG28P0DPA3 235 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 SMARCA1P28370 1054 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 FKBP1BP68106 108 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 FAM47AQ5JRC9 791 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 IFIT1BQ5T764 474 aaKnown RBP10.83□□□□□ -0.68
ABCA1-204ENST00000494467 CHST3Q7LGC8 479 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.83□□□□□ -0.68
ABCA1-204ENST00000494467 GTF3C6Q969F1 213 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 CEP95Q96GE4 821 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 TCEANC2Q96MN5 208 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 TRIM34Q9BYJ4 488 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 TOMM22Q9NS69 142 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 ZBTB21Q9ULJ3 1066 aa10.83□□□□□ -0.68
ABCA1-204ENST00000494467 USP2O75604 605 aaPredicted RBP10.82□□□□□ -0.68
ABCA1-204ENST00000494467 JAG1P78504 1218 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 APOBRQ0VD83 1088 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 ST3GAL1Q11201 340 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 GMCL1P1Q8NEA9 526 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 CDCA5Q96FF9 252 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 TMEM47Q9BQJ4 181 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 SENP2Q9HC62 589 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 CABP5Q9NP86 173 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 NMRK2Q9NPI5 230 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
ABCA1-204ENST00000494467 LOC285556D6RIA3 1793 aa10.82□□□□□ -0.68
ABCA1-204ENST00000494467 KLF18A0A0U1RQI7 1052 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 CCDC196A0A1B0GTZ2 297 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 CCDC69A6NI79 296 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 FAM196BA6NMK8 535 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 ZBTB43O43298 467 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 DHX16O60231 1041 aaKnown RBP10.81□□□□□ -0.68
ABCA1-204ENST00000494467 PPP1R12BO60237 982 aaPredicted RBP10.81□□□□□ -0.68
ABCA1-204ENST00000494467 NMT2O60551 498 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 LARGE1O95461 756 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
ABCA1-204ENST00000494467 PDIA4P13667 645 aaKnown RBP10.81□□□□□ -0.68
ABCA1-204ENST00000494467 NF2P35240 595 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 DDIT3P35638 169 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 FGD1P98174 961 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 LDLRAD1Q5T700 205 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 CATIPQ7Z7H3 387 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 USP48Q86UV5 1035 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 SCYL3Q8IZE3 742 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 ZNF654Q8IZM8 581 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 FANCBQ8NB91 859 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 SMARCC2Q8TAQ2 1214 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 ZKSCAN3Q9BRR0 538 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 FAM217BQ9NTX9 383 aaPredicted RBP10.81□□□□□ -0.68
ABCA1-204ENST00000494467 TMX2Q9Y320 296 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 SLC12A7Q9Y666 1083 aa10.81□□□□□ -0.68
ABCA1-204ENST00000494467 RLFQ13129 1914 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 PALM3A6NDB9 673 aaPredicted RBP10.8□□□□□ -0.68
ABCA1-204ENST00000494467 ADM5C9JUS6 153 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 PLA2G6O60733 806 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 GH2P01242 217 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 SLURP2P0DP57 97 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 IFNAR1P17181 557 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 FUT2Q10981 343 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 SCRN1Q12765 414 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 GRM4Q14833 912 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 SEPT2Q15019 361 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 NTRK3Q16288 839 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 EAPPQ56P03 285 aaPredicted RBP10.8□□□□□ -0.68
ABCA1-204ENST00000494467 CHADLQ6NUI6 762 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 SYNE3Q6ZMZ3 975 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 MIGA2Q7L4E1 593 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 FAM177A1Q8N128 213 aaPredicted RBP10.8□□□□□ -0.68
ABCA1-204ENST00000494467 STK11IPQ8N1F8 1099 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 PNMA1Q8ND90 353 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 SLKQ9H2G2 1235 aaPredicted RBP10.8□□□□□ -0.68
ABCA1-204ENST00000494467 KAT14Q9H8E8 782 aa10.8□□□□□ -0.68
ABCA1-204ENST00000494467 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
ABCA1-204ENST00000494467 RBM28Q9NW13 759 aaKnown RBP10.8□□□□□ -0.68
ABCA1-204ENST00000494467 USP17L5A8MUK1 530 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 KIF3CO14782 793 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 EEF2P13639 858 aaKnown RBP10.79□□□□□ -0.68
ABCA1-204ENST00000494467 KIF5BP33176 963 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 IREB2P48200 963 aaKnown RBP10.79□□□□□ -0.68
ABCA1-204ENST00000494467 GNAQP50148 359 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 MAP3K9P80192 1104 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 ICA1Q05084 483 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.79□□□□□ -0.68
ABCA1-204ENST00000494467 C12orf42Q96LP6 360 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 LZTS2Q9BRK4 669 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 GLIS2Q9BZE0 524 aaPredicted RBP10.79□□□□□ -0.68
ABCA1-204ENST00000494467 KIAA1683Q9H0B3 1180 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 SH2D4AQ9H788 454 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms