RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ECE1P42892 770 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 SPRYD7Q5W111 196 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 ARHGEF10LQ9HCE6 1279 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 ZSWIM5Q9P217 1185 aa17.17■□□□□ 0.34
BRCA1-223ENST00000494123 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 CAPNS2Q96L46 248 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 FEZ1Q99689 392 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 ZKSCAN3Q9BRR0 538 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
BRCA1-223ENST00000494123 STX8Q9UNK0 236 aa17.16■□□□□ 0.34
BRCA1-223ENST00000494123 IRF6O14896 467 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 NMT2O60551 498 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 PSMA5P28066 241 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 SPP2Q13103 211 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 ADCK5Q3MIX3 580 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
BRCA1-223ENST00000494123 JAKMIP1Q96N16 626 aaKnown RBP17.15■□□□□ 0.34
BRCA1-223ENST00000494123 WDR18Q9BV38 432 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
BRCA1-223ENST00000494123 IGKV6D-41A0A0C4DH26 115 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 ERICH2A1L162 156 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 USP17L10C9JJH3 530 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 TTLL1O95922 423 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
BRCA1-223ENST00000494123 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
BRCA1-223ENST00000494123 MCM5P33992 734 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 GJA5P36382 358 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 ANAPC15P60006 121 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 SART3Q15020 963 aaKnown RBP17.14■□□□□ 0.33
BRCA1-223ENST00000494123 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 ZSCAN10Q96SZ4 725 aaPredicted RBP17.14■□□□□ 0.33
BRCA1-223ENST00000494123 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 IL17RBQ9NRM6 502 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 MYH4Q9Y623 1939 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 FAM155AB1AL88 458 aaPredicted RBP17.14■□□□□ 0.33
BRCA1-223ENST00000494123 CXCL11O14625 94 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 GTF2A2P52657 109 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 NYAP2Q9P242 653 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
BRCA1-223ENST00000494123 TNKSO95271 1327 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 PRC1O43663 620 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 CASTP20810 708 aaKnown RBP17.13■□□□□ 0.33
BRCA1-223ENST00000494123 BACE1P56817 501 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 NOGQ13253 232 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 MTMR2Q13614 643 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 ZYXQ15942 572 aaKnown RBP17.13■□□□□ 0.33
BRCA1-223ENST00000494123 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 ACER1Q8TDN7 264 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
BRCA1-223ENST00000494123 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
BRCA1-223ENST00000494123 C19orf81C9J6K1 198 aa17.12■□□□□ 0.33
BRCA1-223ENST00000494123 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
BRCA1-223ENST00000494123 RAD21O60216 631 aa17.12■□□□□ 0.33
BRCA1-223ENST00000494123 USP14P54578 494 aa17.12■□□□□ 0.33
BRCA1-223ENST00000494123 DHX32Q7L7V1 743 aaKnown RBP17.12■□□□□ 0.33
BRCA1-223ENST00000494123 TTC14Q96N46 770 aa17.12■□□□□ 0.33
BRCA1-223ENST00000494123 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
BRCA1-223ENST00000494123 PTPRFP10586 1907 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 A0A1W2PRG0 241 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 MANSC4A6NHS7 340 aaPredicted RBP17.11■□□□□ 0.33
BRCA1-223ENST00000494123 CETPP11597 493 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 VEGFBP49765 207 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 HMGCS2P54868 508 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 ANTXR2P58335 489 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 KIAA1683Q9H0B3 1180 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
BRCA1-223ENST00000494123 CCL15-CCL14A0A0B4J2E2 113 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 A0A0G2JLL6 359 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-223ENST00000494123 AOC2O75106 756 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 FGD1P98174 961 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 WTAPQ15007 396 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 CCL15Q16663 113 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 TMEM67Q5HYA8 995 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 IFIT1BQ5T764 474 aaKnown RBP17.1■□□□□ 0.33
BRCA1-223ENST00000494123 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 PRRT2Q7Z6L0 340 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-223ENST00000494123 LRRC47Q8N1G4 583 aaKnown RBP17.1■□□□□ 0.33
BRCA1-223ENST00000494123 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
BRCA1-223ENST00000494123 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 CYP46A1Q9Y6A2 500 aa17.1■□□□□ 0.33
BRCA1-223ENST00000494123 WDR19Q8NEZ3 1342 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms