RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 KIF2CQ99661 725 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 R3HCC1Q9Y3T6 440 aaKnown RBP6.1□□□□□ -1.43
CD46-216ENST00000490278 IGSF3O75054 1194 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 SLITRK5O94991 958 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 ACRP10323 421 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 POLR2BP30876 1174 aaKnown RBP6.09□□□□□ -1.43
CD46-216ENST00000490278 GBP1P32455 592 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 CASP7P55210 303 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 SOGA3Q5TF21 947 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 RNF43Q68DV7 783 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 LETMD1Q6P1Q0 360 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 ZAR1Q86SH2 424 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 TTC6Q86TZ1 520 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 TOP6BLQ8N6T0 577 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 BAHD1Q8TBE0 780 aaPredicted RBP6.09□□□□□ -1.43
CD46-216ENST00000490278 GATA6Q92908 595 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 SLC9A7Q96T83 725 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 DUSP23Q9BVJ7 150 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 ACTR10Q9NZ32 417 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 CEP131Q9UPN4 1083 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 SLC12A7Q9Y666 1083 aa6.09□□□□□ -1.43
CD46-216ENST00000490278 A0A1W2PQH9 124 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 FAM87AP0C7U9 286 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 ITGB7P26010 798 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 ADMP35318 185 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 ETV3P41162 512 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 NFIAQ12857 509 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 NKAPLQ5M9Q1 402 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 OGFOD3Q6PK18 319 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 UNC5AQ6ZN44 842 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 RIN3Q8TB24 985 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 PPP1R13LQ8WUF5 828 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 HNRNPLLQ8WVV9 542 aaKnown RBP6.08□□□□□ -1.44
CD46-216ENST00000490278 MFSD14AQ96MC6 490 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.08□□□□□ -1.44
CD46-216ENST00000490278 TNKS2Q9H2K2 1166 aa6.08□□□□□ -1.44
CD46-216ENST00000490278 FAM86C2PA6NEL3 165 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 GSC2O15499 205 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 KLF4O43474 513 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 LEFTY1O75610 366 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 UBOX5O94941 541 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 CHMP4BP1P59074 171 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 CYP27A1Q02318 531 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 ZYXQ15942 572 aaKnown RBP6.07□□□□□ -1.44
CD46-216ENST00000490278 RSPO4Q2I0M5 234 aaPredicted RBP6.07□□□□□ -1.44
CD46-216ENST00000490278 NBPF6Q5VWK0 638 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
CD46-216ENST00000490278 CDH24Q86UP0 819 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 FBXL6Q8N531 539 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 DNAJB8Q8NHS0 232 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 DHRS1Q96LJ7 313 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 NBPF4Q96M43 638 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 TRIM55Q9BYV6 548 aa6.07□□□□□ -1.44
CD46-216ENST00000490278 EOMESO95936 686 aa6.06□□□□□ -1.44
CD46-216ENST00000490278 IGLV1-40P01703 118 aa6.06□□□□□ -1.44
CD46-216ENST00000490278 FSTP19883 344 aa6.06□□□□□ -1.44
CD46-216ENST00000490278 RAB33AQ14088 237 aa6.06□□□□□ -1.44
CD46-216ENST00000490278 CYP27C1Q4G0S4 372 aa6.06□□□□□ -1.44
CD46-216ENST00000490278 SLC6A18Q96N87 628 aa6.06□□□□□ -1.44
CD46-216ENST00000490278 PHAXQ9H814 394 aaKnown RBP6.06□□□□□ -1.44
CD46-216ENST00000490278 TPX2Q9ULW0 747 aaKnown RBP6.06□□□□□ -1.44
CD46-216ENST00000490278 LTBP3Q9NS15 1303 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 FAM170BA6NMN3 283 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 U2SURPO15042 1029 aaKnown RBP6.05□□□□□ -1.44
CD46-216ENST00000490278 DYRK3O43781 588 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 CLEC3AO75596 197 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 F13BP05160 661 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 CYP7A1P22680 504 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 FXNQ16595 210 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 DUSP27Q5VZP5 1158 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 LARP1BQ659C4 914 aaKnown RBP6.05□□□□□ -1.44
CD46-216ENST00000490278 ZNF765Q7L2R6 523 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 TMEM192Q8IY95 271 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 SHISA5Q8N114 240 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 KREMEN1Q96MU8 473 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 METTL22Q9BUU2 404 aaPredicted RBP6.05□□□□□ -1.44
CD46-216ENST00000490278 PRDM5Q9NQX1 630 aaPredicted RBP6.05□□□□□ -1.44
CD46-216ENST00000490278 GTF2IRD1Q9UHL9 959 aa6.05□□□□□ -1.44
CD46-216ENST00000490278 PMS1P54277 932 aaKnown RBP6.04□□□□□ -1.44
CD46-216ENST00000490278 RNF4P78317 190 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 BBS9Q3SYG4 887 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 SHKBP1Q8TBC3 707 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 RNF141Q8WVD5 230 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 COX4I2Q96KJ9 171 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 OSBPL1AQ9BXW6 950 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 LNPKQ9C0E8 428 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 ATG3Q9NT62 314 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 SIRPGQ9P1W8 387 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 SUCOQ9UBS9 1254 aaKnown RBP6.04□□□□□ -1.44
CD46-216ENST00000490278 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
CD46-216ENST00000490278 MAPK8IP1Q9UQF2 711 aa6.04□□□□□ -1.44
CD46-216ENST00000490278 WDR64B1ANS9 1081 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 CPSF6Q16630 551 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD46-216ENST00000490278 DDR2Q16832 855 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms