RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 REV1Q9UBZ9 1251 aa5.9□□□□□ -1.46
NF1-213ENST00000489712 KLHL3Q9UH77 587 aa5.9□□□□□ -1.46
NF1-213ENST00000489712 POLR3KQ9Y2Y1 108 aaPredicted RBP5.9□□□□□ -1.46
NF1-213ENST00000489712 PRR36Q9H6K5 1346 aa5.9□□□□□ -1.47
NF1-213ENST00000489712 HTR3BO95264 441 aa5.89□□□□□ -1.47
NF1-213ENST00000489712 GARTP22102 1010 aa5.89□□□□□ -1.47
NF1-213ENST00000489712 FAM196AQ6ZSG2 479 aa5.89□□□□□ -1.47
NF1-213ENST00000489712 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
NF1-213ENST00000489712 CEP131Q9UPN4 1083 aa5.89□□□□□ -1.47
NF1-213ENST00000489712 SUPT16HQ9Y5B9 1047 aaKnown RBP5.89□□□□□ -1.47
NF1-213ENST00000489712 UPK3BL1B0FP48 263 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 UPK3BL2E5RIL1 263 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 GRIN3BO60391 1043 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 TNNI2P48788 182 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 MLECQ14165 292 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 TMPRSS7Q7RTY8 843 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 ZSWIM9Q86XI8 627 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 FBXO27Q8NI29 283 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 PPP1R13LQ8WUF5 828 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 RNF141Q8WVD5 230 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 UBE2FQ969M7 185 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 CCDC120Q96HB5 630 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 Q96M66 194 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 LRRC3Q9BY71 257 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 TRIT1Q9H3H1 467 aaKnown RBP5.88□□□□□ -1.47
NF1-213ENST00000489712 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 KCNQ5Q9NR82 932 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 ZSWIM5Q9P217 1185 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 GGT7Q9UJ14 662 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 KCNH3Q9ULD8 1083 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 CTNND2Q9UQB3 1225 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
NF1-213ENST00000489712 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
NF1-213ENST00000489712 TLR3O15455 904 aaKnown RBP5.87□□□□□ -1.47
NF1-213ENST00000489712 YBX3P16989 372 aaKnown RBP eCLIP5.87□□□□□ -1.47
NF1-213ENST00000489712 EIF4A3P38919 411 aaKnown RBP5.87□□□□□ -1.47
NF1-213ENST00000489712 CHMP4BP1P59074 171 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 PHACTR4Q8IZ21 702 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 POU5F2Q8N7G0 328 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 DTWD2Q8NBA8 298 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 ALPK1Q96QP1 1244 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 GPATCH2Q9NW75 528 aa5.87□□□□□ -1.47
NF1-213ENST00000489712 ROBO2Q9HCK4 1378 aa5.86□□□□□ -1.47
NF1-213ENST00000489712 ZNF16P17020 682 aaPredicted RBP5.86□□□□□ -1.47
NF1-213ENST00000489712 AFMP43652 599 aa5.86□□□□□ -1.47
NF1-213ENST00000489712 KCNMB1Q16558 191 aa5.86□□□□□ -1.47
NF1-213ENST00000489712 FBXL19Q6PCT2 694 aa5.86□□□□□ -1.47
NF1-213ENST00000489712 CCDC74BQ96LY2 380 aa5.86□□□□□ -1.47
NF1-213ENST00000489712 ASPNQ9BXN1 380 aa5.86□□□□□ -1.47
NF1-213ENST00000489712 CHURC1-FNTBB4DL54 471 aa5.85□□□□□ -1.47
NF1-213ENST00000489712 GDNFP39905 211 aa5.85□□□□□ -1.47
NF1-213ENST00000489712 KRTAP1-3Q8IUG1 177 aa5.85□□□□□ -1.47
NF1-213ENST00000489712 SLAMF8Q9P0V8 285 aa5.85□□□□□ -1.47
NF1-213ENST00000489712 DNAJA2O60884 412 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 ESR1P03372 595 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 RAG1P15918 1043 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 TPP2P29144 1249 aaPredicted RBP5.84□□□□□ -1.47
NF1-213ENST00000489712 MFAP1P55081 439 aaKnown RBP5.84□□□□□ -1.47
NF1-213ENST00000489712 CREG2Q8IUH2 290 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 BAHD1Q8TBE0 780 aaPredicted RBP5.84□□□□□ -1.47
NF1-213ENST00000489712 ZNF296Q8WUU4 475 aaPredicted RBP5.84□□□□□ -1.47
NF1-213ENST00000489712 KIRREL1Q96J84 757 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 KREMEN1Q96MU8 473 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 GPR62Q9BZJ7 368 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 BRMS1Q9HCU9 246 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 DUSP13Q9UII6 198 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 PCDHB14Q9Y5E9 798 aa5.84□□□□□ -1.47
NF1-213ENST00000489712 GREM1O60565 184 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 SRFP11831 508 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 RAC2P15153 192 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 LTKP29376 864 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 GBP1P32455 592 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 RNF4P78317 190 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 APOBRQ0VD83 1088 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 GAB4Q2WGN9 574 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 TSPYL5Q86VY4 417 aaPredicted RBP5.83□□□□□ -1.48
NF1-213ENST00000489712 HOMEZQ8IX15 550 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 TMEM87AQ8NBN3 555 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 KIF2CQ99661 725 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 DUSP15Q9H1R2 295 aaPredicted RBP5.83□□□□□ -1.48
NF1-213ENST00000489712 C19orf73Q9NVV2 129 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 UBP1Q9NZI7 540 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 GMIPQ9P107 970 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 ADAMTS1Q9UHI8 967 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 TMEM59LQ9UK28 342 aa5.83□□□□□ -1.48
NF1-213ENST00000489712 RBAK-RBAKDNI3L0D1 243 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 FARP2O94887 1054 aaPredicted RBP5.82□□□□□ -1.48
NF1-213ENST00000489712 ATE1O95260 518 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 C8AP07357 584 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 GLI1P08151 1106 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 CRKP46108 304 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 SEZ6Q53EL9 994 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 OVOS1Q6IE37 1185 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 TTC6Q86TZ1 520 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 KIAA0825Q8IV33 1275 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 FAM53CQ9NYF3 392 aa5.82□□□□□ -1.48
NF1-213ENST00000489712 LRRC10BA6NIK2 292 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms