RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
COL16A1-215ENST00000488897 EPB41L4AQ9HCS5 686 aaPredicted RBP21.17■□□□□ 0.98
COL16A1-215ENST00000488897 FAM196BA6NMK8 535 aa21.17■□□□□ 0.98
COL16A1-215ENST00000488897 PDIA3P30101 505 aaKnown RBP21.17■□□□□ 0.98
COL16A1-215ENST00000488897 GGA3Q9NZ52 723 aa21.17■□□□□ 0.98
COL16A1-215ENST00000488897 ZNF70Q9UC06 446 aaPredicted RBP21.17■□□□□ 0.98
COL16A1-215ENST00000488897 NRBP1Q9UHY1 535 aa21.17■□□□□ 0.98
COL16A1-215ENST00000488897 CLEC11AQ9Y240 323 aa21.17■□□□□ 0.98
COL16A1-215ENST00000488897 RIOK3O14730 519 aaKnown RBP21.16■□□□□ 0.98
COL16A1-215ENST00000488897 KINO60870 393 aaKnown RBP21.16■□□□□ 0.98
COL16A1-215ENST00000488897 HAND2P61296 217 aa21.16■□□□□ 0.98
COL16A1-215ENST00000488897 GSTO1P78417 241 aa21.16■□□□□ 0.98
COL16A1-215ENST00000488897 TSC1Q92574 1164 aa21.16■□□□□ 0.98
COL16A1-215ENST00000488897 USP28Q96RU2 1077 aa21.16■□□□□ 0.98
COL16A1-215ENST00000488897 TMEM39BQ9GZU3 492 aa21.16■□□□□ 0.98
COL16A1-215ENST00000488897 SUGT1Q9Y2Z0 365 aa21.16■□□□□ 0.98
COL16A1-215ENST00000488897 ZFYP08048 801 aaPredicted RBP21.16■□□□□ 0.98
COL16A1-215ENST00000488897 GSG1L2A8MUP6 293 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 LDHCP07864 332 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 FAM160A1Q05DH4 1040 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 SNW1Q13573 536 aaKnown RBP21.15■□□□□ 0.98
COL16A1-215ENST00000488897 MAP1SQ66K74 1059 aaPredicted RBP21.15■□□□□ 0.98
COL16A1-215ENST00000488897 FAM198AQ9UFP1 575 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 CTNNA3Q9UI47 895 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 NAP1L2Q9ULW6 460 aaPredicted RBP21.15■□□□□ 0.98
COL16A1-215ENST00000488897 YY1P25490 414 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 FOSBP53539 338 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 LRMPQ12912 555 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 FAM163AQ96GL9 167 aaPredicted RBP21.15■□□□□ 0.98
COL16A1-215ENST00000488897 MRFAP1L1Q96HT8 127 aa21.15■□□□□ 0.98
COL16A1-215ENST00000488897 L3MBTL3Q96JM7 780 aaPredicted RBP21.15■□□□□ 0.98
COL16A1-215ENST00000488897 USP5P45974 858 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 EVCP57679 992 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 ENGASEQ8NFI3 743 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 ZBED3Q96IU2 234 aaPredicted RBP21.14■□□□□ 0.97
COL16A1-215ENST00000488897 GOLPH3LQ9H4A5 285 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 NCOA5Q9HCD5 579 aaKnown RBP21.14■□□□□ 0.97
COL16A1-215ENST00000488897 ADARB2Q9NS39 739 aaKnown RBP21.14■□□□□ 0.97
COL16A1-215ENST00000488897 ANO10Q9NW15 660 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 BAZ2AQ9UIF9 1905 aaKnown RBP21.14■□□□□ 0.97
COL16A1-215ENST00000488897 ADM5C9JUS6 153 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 NEMFO60524 1076 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 PRKG1Q13976 671 aa21.14■□□□□ 0.97
COL16A1-215ENST00000488897 NOL10Q9BSC4 688 aaKnown RBP21.14■□□□□ 0.97
COL16A1-215ENST00000488897 BECN2A8MW95 431 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 CTIFO43310 598 aaKnown RBP21.13■□□□□ 0.97
COL16A1-215ENST00000488897 BAG3O95817 575 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 ME1P48163 572 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 FTOQ9C0B1 505 aaKnown RBP eCLIP21.13■□□□□ 0.97
COL16A1-215ENST00000488897 DDTLA6NHG4 134 aaPredicted RBP21.13■□□□□ 0.97
COL16A1-215ENST00000488897 MINDY4BA8MYZ0 360 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 FGAP02671 866 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 PLCD1P51178 756 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 C11orf57Q6ZUT1 292 aaPredicted RBP21.13■□□□□ 0.97
COL16A1-215ENST00000488897 SH3BP5LQ7L8J4 393 aa21.13■□□□□ 0.97
COL16A1-215ENST00000488897 ZBTB22O15209 634 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 FSIP1Q8NA03 581 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 GPBP1L1Q9HC44 474 aaPredicted RBP21.12■□□□□ 0.97
COL16A1-215ENST00000488897 DCP1AQ9NPI6 582 aaPredicted RBP21.12■□□□□ 0.97
COL16A1-215ENST00000488897 MCM9Q9NXL9 1143 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 TRAF5O00463 557 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 ZSCAN29Q8IWY8 852 aaPredicted RBP21.12■□□□□ 0.97
COL16A1-215ENST00000488897 SLF2Q8IX21 1173 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 IFNL3Q8IZI9 196 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 CACTINQ8WUQ7 758 aaKnown RBP21.12■□□□□ 0.97
COL16A1-215ENST00000488897 RTEL1Q9NZ71 1219 aa21.12■□□□□ 0.97
COL16A1-215ENST00000488897 FLT1P17948 1338 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 USP17L12C9JPN9 530 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 USP17L21D6R901 530 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 DHX16O60231 1041 aaKnown RBP21.11■□□□□ 0.97
COL16A1-215ENST00000488897 VEGFAP15692 232 aaPredicted RBP21.11■□□□□ 0.97
COL16A1-215ENST00000488897 PPP4CP60510 307 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 CTDSPL2Q05D32 466 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 SPDYE2Q495Y8 402 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 MIGA2Q7L4E1 593 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 DYNLL2Q96FJ2 89 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 GLIS2Q9BZE0 524 aaPredicted RBP21.11■□□□□ 0.97
COL16A1-215ENST00000488897 TACC3Q9Y6A5 838 aa21.11■□□□□ 0.97
COL16A1-215ENST00000488897 HDLBPQ00341 1268 aaKnown RBP21.1■□□□□ 0.97
COL16A1-215ENST00000488897 IMMTQ16891 758 aaKnown RBP21.1■□□□□ 0.97
COL16A1-215ENST00000488897 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 CHST3Q7LGC8 479 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 NAT10Q9H0A0 1025 aaKnown RBP21.1■□□□□ 0.97
COL16A1-215ENST00000488897 SMTNL1A8MU46 457 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 RASA3Q14644 834 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 SHROOM1Q2M3G4 852 aaPredicted RBP21.1■□□□□ 0.97
COL16A1-215ENST00000488897 SMAP1Q8IYB5 467 aaPredicted RBP21.1■□□□□ 0.97
COL16A1-215ENST00000488897 SLC44A5Q8NCS7 719 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 MRPS27Q92552 414 aaKnown RBP21.1■□□□□ 0.97
COL16A1-215ENST00000488897 PAXBP1Q9Y5B6 917 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 CNTNAP1P78357 1384 aa21.1■□□□□ 0.97
COL16A1-215ENST00000488897 A0A1W2PQ27 194 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 A0A1W2PQ64 194 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 A0A1W2PQD8 194 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 FDPSP14324 419 aaKnown RBP21.09■□□□□ 0.97
COL16A1-215ENST00000488897 TDO2P48775 406 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 GUCY1B3Q02153 619 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 CCDC144BQ3MJ40 725 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms