RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CFAP100Q494V2 611 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 SLC9C1Q4G0N8 1177 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 TTLL5Q6EMB2 1281 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 LYPD8Q6UX82 237 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 SCYL3Q8IZE3 742 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP6NLQ92738 828 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 TEKT1Q969V4 418 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 PRIMPOLQ96LW4 560 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USB1Q9BQ65 265 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 MBIPQ9NS73 344 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 AGTPBP1Q9UPW5 1226 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 DIS3Q9Y2L1 958 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 RRP7AQ9Y3A4 280 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L15C9J2P7 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L10C9JJH3 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L13C9JLJ4 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L12C9JPN9 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L11C9JVI0 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L21D6R901 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L18D6R9N7 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L22D6RA61 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L17D6RBQ6 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L19D6RCP7 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L20D6RJB6 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 E9PSI1 815 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 FARP2O94887 1054 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 ABL1P00519 1130 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 IGKV5-2P06315 115 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 HCLS1P14317 486 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 MAPK4P31152 587 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 GRK4P32298 578 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 CLDN10P78369 228 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L24Q0WX57 530 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 IFIT5Q13325 482 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 MTX1Q13505 466 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 PROSER3Q2NL68 480 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 NECAB2Q7Z6G3 386 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 CCDC24Q8N4L8 307 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 VGLL2Q8N8G2 317 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 DNAAF4Q8WXU2 420 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 OPTNQ96CV9 577 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 TSEN34Q9BSV6 310 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 EHD4Q9H223 541 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 DBNDD1Q9H9R9 158 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 GNL3LQ9NVN8 582 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 PNMA2Q9UL42 364 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 DENND2AQ9ULE3 1009 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 ANGEL1Q9UNK9 670 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 RPTORQ8N122 1335 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 CCL15-CCL14A0A0B4J2E2 113 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 LRRC37A2A6NM11 1700 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 SIPA1L1O43166 1804 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 GLRX3O76003 335 aaKnown RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 TNKSO95271 1327 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 LDHCP07864 332 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 MYL6BP14649 208 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 CRKP46108 304 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 SOX10P56693 466 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 PPP4CP60510 307 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 CAP1Q01518 475 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 CHRNDQ07001 517 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 DPYDQ12882 1025 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 RLFQ13129 1914 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 PUM3Q15397 648 aaKnown RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 TAF1CQ15572 869 aaPredicted RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 CCL15Q16663 113 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 GPAT2Q6NUI2 795 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 ARHGAP45Q92619 1136 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 BORCS6Q96GS4 357 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 MPHOSPH8Q99549 860 aa3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 GREB1LQ9C091 1923 aaPredicted RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 DHX36Q9H2U1 1008 aaKnown RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 BIN2Q9UBW5 565 aaPredicted RBP3.4□□□□□ -1.86
DEPDC1-203ENST00000488146 UBE2Q2LH0YL09 131 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 F12P00748 615 aaPredicted RBP3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 HIBADHP31937 336 aaKnown RBP3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 PTK7Q13308 1070 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 LINC01559Q495D7 138 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 OXLD1Q5BKU9 147 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 CAVIN4Q5BKX8 364 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 BEND3Q5T5X7 828 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 PTCRAQ6ISU1 281 aaPredicted RBP3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 Q6ZNB5 142 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 RNF135Q8IUD6 432 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 DZIP1LQ8IYY4 767 aaKnown RBP3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 MB21D1Q8N884 522 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 CD99L2Q8TCZ2 262 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 PURBQ96QR8 312 aaKnown RBP3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 MYD88Q99836 296 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 RIPOR2Q9Y4F9 1068 aa3.4□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC15A5A6NIM6 579 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 GRM8O00222 908 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 TBC1D8O95759 1140 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 IFIT1P09914 478 aaKnown RBP3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 CCL5P13501 91 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC5A1P13866 664 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 ITGA6P23229 1130 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 VGLL4Q14135 290 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 RASA3Q14644 834 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms