RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ERVFC1P60507 584 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 XPCQ01831 940 aaPredicted RBP7.94□□□□□ -1.14
SMC4-219ENST00000487747 PDE4BQ07343 736 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 CAMK2GQ13555 558 aaPredicted RBP7.94□□□□□ -1.14
SMC4-219ENST00000487747 KSR1Q8IVT5 923 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 KCNK12Q9HB15 430 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 SLAMF8Q9P0V8 285 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 ADAM30Q9UKF2 790 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 CEP131Q9UPN4 1083 aa7.94□□□□□ -1.14
SMC4-219ENST00000487747 GLI1P08151 1106 aa7.93□□□□□ -1.14
SMC4-219ENST00000487747 PLCG1P19174 1290 aa7.93□□□□□ -1.14
SMC4-219ENST00000487747 ALPK1Q96QP1 1244 aa7.93□□□□□ -1.14
SMC4-219ENST00000487747 DBX1A6NMT0 343 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 LRRN2O75325 713 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 RLBP1P12271 317 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
SMC4-219ENST00000487747 ETV3P41162 512 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 PIWIL2Q8TC59 973 aaKnown RBP7.92□□□□□ -1.14
SMC4-219ENST00000487747 COX4I2Q96KJ9 171 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 FAM84AQ96KN4 292 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 RHOVQ96L33 236 aa7.92□□□□□ -1.14
SMC4-219ENST00000487747 DNAJA2O60884 412 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 LMNB2Q03252 620 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 GAB4Q2WGN9 574 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 TTC6Q86TZ1 520 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
SMC4-219ENST00000487747 CILP2Q8IUL8 1156 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 FAM13CQ8NE31 585 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 GATAD2BQ8WXI9 593 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 CRELD1Q96HD1 420 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 ADAMTS10Q9H324 1103 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 FAM53CQ9NYF3 392 aa7.91□□□□□ -1.14
SMC4-219ENST00000487747 POLR3KQ9Y2Y1 108 aaPredicted RBP7.91□□□□□ -1.14
SMC4-219ENST00000487747 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 TPP2P29144 1249 aaPredicted RBP7.9□□□□□ -1.14
SMC4-219ENST00000487747 HK2P52789 917 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 FAM160A1Q05DH4 1040 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 TMEM67Q5HYA8 995 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 TMEM201Q5SNT2 666 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 MPZL3Q6UWV2 235 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 CREG2Q8IUH2 290 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 FBXO27Q8NI29 283 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 CYB5D2Q8WUJ1 264 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 SLC38A3Q99624 504 aa7.9□□□□□ -1.14
SMC4-219ENST00000487747 MINDY4BA8MYZ0 360 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 SORBS3O60504 671 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 SRFP11831 508 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 GBP2P32456 591 aaPredicted RBP7.89□□□□□ -1.15
SMC4-219ENST00000487747 PKN1Q16512 942 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 LCE4AQ5TA78 99 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 TMPRSS7Q7RTY8 843 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 DTWD2Q8NBA8 298 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 REV1Q9UBZ9 1251 aa7.89□□□□□ -1.15
SMC4-219ENST00000487747 PRR36Q9H6K5 1346 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 BPNT1O95861 308 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 KRT1P04264 644 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 TRHRP34981 398 aaPredicted RBP7.88□□□□□ -1.15
SMC4-219ENST00000487747 BAHD1Q8TBE0 780 aaPredicted RBP7.88□□□□□ -1.15
SMC4-219ENST00000487747 DIRC2Q96SL1 478 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 RSRP1Q9BUV0 290 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 VTI1BQ9UEU0 232 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 KLHL3Q9UH77 587 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 TMEM59LQ9UK28 342 aa7.88□□□□□ -1.15
SMC4-219ENST00000487747 GARTP22102 1010 aa7.87□□□□□ -1.15
SMC4-219ENST00000487747 SPOCD1Q6ZMY3 1216 aa7.87□□□□□ -1.15
SMC4-219ENST00000487747 RELL1Q8IUW5 271 aa7.87□□□□□ -1.15
SMC4-219ENST00000487747 SLFN12Q8IYM2 578 aa7.87□□□□□ -1.15
SMC4-219ENST00000487747 GPR62Q9BZJ7 368 aa7.87□□□□□ -1.15
SMC4-219ENST00000487747 COPRSQ9NQ92 184 aa7.87□□□□□ -1.15
SMC4-219ENST00000487747 HTR3BO95264 441 aa7.86□□□□□ -1.15
SMC4-219ENST00000487747 SYDE1Q6ZW31 735 aaPredicted RBP7.86□□□□□ -1.15
SMC4-219ENST00000487747 TSPYL5Q86VY4 417 aaPredicted RBP7.86□□□□□ -1.15
SMC4-219ENST00000487747 GOLM1Q8NBJ4 401 aa7.86□□□□□ -1.15
SMC4-219ENST00000487747 ABHD4Q8TB40 342 aa7.86□□□□□ -1.15
SMC4-219ENST00000487747 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
SMC4-219ENST00000487747 SP110Q9HB58 689 aa7.86□□□□□ -1.15
SMC4-219ENST00000487747 SHISA3A0PJX4 238 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 YARSP54577 528 aaKnown RBP7.85□□□□□ -1.15
SMC4-219ENST00000487747 EGR3Q06889 387 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 C19orf44Q9H6X5 657 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 KBTBD4Q9NVX7 518 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 DUSP13Q9UII6 198 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 PCDHA11Q9Y5I1 949 aa7.85□□□□□ -1.15
SMC4-219ENST00000487747 TLR3O15455 904 aaKnown RBP7.84□□□□□ -1.15
SMC4-219ENST00000487747 HPXP02790 462 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 SNAP47Q5SQN1 464 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 BHLHE22Q8NFJ8 381 aaPredicted RBP7.84□□□□□ -1.15
SMC4-219ENST00000487747 RNF141Q8WVD5 230 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 MYLIPQ8WY64 445 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 CCDC120Q96HB5 630 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 KREMEN1Q96MU8 473 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 GZF1Q9H116 711 aaPredicted RBP7.84□□□□□ -1.15
SMC4-219ENST00000487747 TRIT1Q9H3H1 467 aaKnown RBP7.84□□□□□ -1.15
SMC4-219ENST00000487747 GPATCH2Q9NW75 528 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 EBF1Q9UH73 591 aa7.84□□□□□ -1.15
SMC4-219ENST00000487747 C1QTNF9P0C862 333 aa7.83□□□□□ -1.16
SMC4-219ENST00000487747 CFPP27918 469 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms