RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 MYH1P12882 1939 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 DDX60LQ5H9U9 1706 aaKnown RBP10.44□□□□□ -0.74
PRKCB-208ENST00000487674 HMGCRP04035 888 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 HLA-DOAP06340 250 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 RLBP1P12271 317 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 BACE1P56817 501 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 IRX3P78415 501 aaPredicted RBP10.43□□□□□ -0.74
PRKCB-208ENST00000487674 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
PRKCB-208ENST00000487674 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 FOXP4Q8IVH2 680 aaPredicted RBP10.43□□□□□ -0.74
PRKCB-208ENST00000487674 DEFB118Q96PH6 123 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 TLR7Q9NYK1 1049 aaKnown RBP10.43□□□□□ -0.74
PRKCB-208ENST00000487674 TMOD4Q9NZQ9 345 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 MORF4L1Q9UBU8 362 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 PALD1Q9ULE6 856 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 NR2E3Q9Y5X4 410 aa10.43□□□□□ -0.74
PRKCB-208ENST00000487674 C19orf81C9J6K1 198 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 ZBTB7BO15156 539 aaPredicted RBP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 CYP7A1P22680 504 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 HOXA7P31268 230 aaPredicted RBP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 JAG1P78504 1218 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 TMED8Q6PL24 325 aaPredicted RBP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 ERC1Q8IUD2 1116 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 EAF2Q96CJ1 260 aaPredicted RBP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 SAP30BPQ9UHR5 308 aaKnown RBP10.42□□□□□ -0.74
PRKCB-208ENST00000487674 ALPK3Q96L96 1907 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
PRKCB-208ENST00000487674 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 GDF11O95390 407 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 TFRCP02786 760 aaKnown RBP10.41□□□□□ -0.74
PRKCB-208ENST00000487674 HERVK_113P62684 666 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 DYNLL1P63167 89 aaKnown RBP10.41□□□□□ -0.74
PRKCB-208ENST00000487674 SHROOM1Q2M3G4 852 aaPredicted RBP10.41□□□□□ -0.74
PRKCB-208ENST00000487674 CEP85Q6P2H3 762 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 GTF3C2Q8WUA4 911 aaPredicted RBP10.41□□□□□ -0.74
PRKCB-208ENST00000487674 SOCS4Q8WXH5 440 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 CCDC8Q9H0W5 538 aaPredicted RBP10.41□□□□□ -0.74
PRKCB-208ENST00000487674 EHD4Q9H223 541 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
PRKCB-208ENST00000487674 GJD2Q9UKL4 321 aa10.41□□□□□ -0.74
PRKCB-208ENST00000487674 EVI5O60447 810 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 USP5P45974 858 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 MAP3K12Q12852 859 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 MAGEB6Q8N7X4 407 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 ANKLE1Q8NAG6 615 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 MIGA1Q8NAN2 632 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 GPRC5AQ8NFJ5 357 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 PRO3102Q9H379 93 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 TXNRD2Q9NNW7 524 aa10.4□□□□□ -0.74
PRKCB-208ENST00000487674 ZBED9Q6R2W3 1325 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 RPTORQ8N122 1335 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 GH2P01242 217 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
PRKCB-208ENST00000487674 MAPK4P31152 587 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 PDE3AQ14432 1141 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 TATDN1Q6P1N9 297 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 AACSQ86V21 672 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 TRIB2Q92519 343 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 PAWRQ96IZ0 340 aaKnown RBP10.39□□□□□ -0.75
PRKCB-208ENST00000487674 C12orf42Q96LP6 360 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 P2RX7Q99572 595 aaKnown RBP10.39□□□□□ -0.75
PRKCB-208ENST00000487674 FEZ1Q99689 392 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 NUDT12Q9BQG2 462 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 HMX1Q9NP08 348 aaPredicted RBP10.39□□□□□ -0.75
PRKCB-208ENST00000487674 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 SERPINB13Q9UIV8 391 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 EXOC6BQ9Y2D4 811 aa10.39□□□□□ -0.75
PRKCB-208ENST00000487674 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
PRKCB-208ENST00000487674 A0A1W2PPC1 479 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 ERVK-9P63128 1117 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 ERVK-24P63145 666 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 TRIM32Q13049 653 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 MAP3K21Q5TCX8 1036 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 TTC6Q86TZ1 520 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
PRKCB-208ENST00000487674 DIS3LQ8TF46 1054 aaKnown RBP10.38□□□□□ -0.75
PRKCB-208ENST00000487674 ANTXR1Q9H6X2 564 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 RBPJLQ9UBG7 517 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
PRKCB-208ENST00000487674 FRMPD3Q5JV73 1810 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 PEX10O60683 326 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-208ENST00000487674 CYP2B6P20813 491 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 USP14P54578 494 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-208ENST00000487674 ARSIQ5FYB1 569 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 GPR142Q7Z601 462 aa10.37□□□□□ -0.75
PRKCB-208ENST00000487674 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
PRKCB-208ENST00000487674 RHPN1Q8TCX5 695 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms