RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CDK8P49336 464 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 FLT3LGP49771 235 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 USP14P54578 494 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 HERVK_113P62684 666 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
SPEN-205ENST00000487496 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
SPEN-205ENST00000487496 CTR9Q6PD62 1173 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 EXOC6Q8TAG9 804 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 MORF4L1Q9UBU8 362 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 HTTP42858 3142 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 M0R2C6 588 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 GPAA1O43292 621 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 AKR1B1P15121 316 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 GRK4P32298 578 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 C16orf86Q6ZW13 317 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 COA7Q96BR5 231 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
SPEN-205ENST00000487496 TXNRD2Q9NNW7 524 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
SPEN-205ENST00000487496 STAP2Q9UGK3 403 aa13.74□□□□□ -0.21
SPEN-205ENST00000487496 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
SPEN-205ENST00000487496 A0A1W2PRG0 241 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 PEX10O60683 326 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 IGHDP01880 384 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 VCAM1P19320 739 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 EN2P19622 333 aaPredicted RBP13.73□□□□□ -0.21
SPEN-205ENST00000487496 PDE1AP54750 535 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 SBK1Q52WX2 424 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 SIAH1Q8IUQ4 282 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 GPRC5AQ8NFJ5 357 aa13.73□□□□□ -0.21
SPEN-205ENST00000487496 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
SPEN-205ENST00000487496 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
SPEN-205ENST00000487496 KIAA0100Q14667 2235 aaKnown RBP13.73□□□□□ -0.21
SPEN-205ENST00000487496 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
SPEN-205ENST00000487496 ADCY3O60266 1144 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 GNAT2P19087 354 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 IRF5Q13568 498 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 MTFR1Q15390 333 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 SLAIN1Q8ND83 568 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
SPEN-205ENST00000487496 LNPKQ9C0E8 428 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 EPB41L4AQ9HCS5 686 aaPredicted RBP13.72□□□□□ -0.21
SPEN-205ENST00000487496 MGAMO43451 1857 aa13.72□□□□□ -0.21
SPEN-205ENST00000487496 MINDY4BA8MYZ0 360 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
SPEN-205ENST00000487496 APPP05067 770 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 Q3C1V9 767 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 CLEC10AQ8IUN9 316 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 PAGR1Q9BTK6 254 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 RPAP3Q9H6T3 665 aaPredicted RBP13.71□□□□□ -0.21
SPEN-205ENST00000487496 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.21
SPEN-205ENST00000487496 GJD2Q9UKL4 321 aa13.71□□□□□ -0.21
SPEN-205ENST00000487496 ELNP15502 786 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 TDO2P48775 406 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 ERVK-24P63145 666 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 UBXN2AP68543 259 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 ICA1Q05084 483 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 KANSL2Q9H9L4 492 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 TMX2Q9Y320 296 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
SPEN-205ENST00000487496 CNMDO75829 334 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 CCL5P13501 91 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 CHD1LQ86WJ1 897 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPEN-205ENST00000487496 NACAP1Q9BZK3 213 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 PORCNQ9H237 461 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
SPEN-205ENST00000487496 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
SPEN-205ENST00000487496 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
SPEN-205ENST00000487496 INHAP05111 366 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms