RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TMEM87BQ96K49 555 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 PRO3102Q9H379 93 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 SH2D4AQ9H788 454 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 PICK1Q9NRD5 415 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 CSADQ9Y600 493 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 SYNGAP1Q96PV0 1343 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 DICER1Q9UPY3 1922 aaKnown RBP8.17□□□□□ -1.1
UBR4-214ENST00000486515 PRC1O43663 620 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 ORC4O43929 436 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 RAD21O60216 631 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 PRDM1O75626 825 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 CYP2D6P10635 497 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 ATP2B2Q01814 1243 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 WTAPQ15007 396 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 ABCB5Q2M3G0 1257 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 TMEM67Q5HYA8 995 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 IFIT1BQ5T764 474 aaKnown RBP8.16□□□□□ -1.1
UBR4-214ENST00000486515 ATRNL1Q5VV63 1379 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 Q7L0L9 218 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 TBC1D10CQ8IV04 446 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 C2orf69Q8N8R5 385 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 PIEZO1Q92508 2521 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 KAT14Q9H8E8 782 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 FOXD4L1Q9NU39 408 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 GINM1Q9NU53 330 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 ISY1Q9ULR0 285 aaKnown RBP8.16□□□□□ -1.1
UBR4-214ENST00000486515 STX8Q9UNK0 236 aa8.16□□□□□ -1.1
UBR4-214ENST00000486515 COL2A1P02458 1487 aaPredicted RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 ASTN2O75129 1339 aaPredicted RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 WDR19Q8NEZ3 1342 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 A0A1W2PPC1 479 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 FOXP2O15409 715 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ASNSP08243 561 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 RPS6KB1P23443 525 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 PRKG1Q13976 671 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 RAB3GAP1Q15042 981 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 RGMBQ6NW40 437 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 CPLX2Q6PUV4 134 aaKnown RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 Q6ZUG5 572 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 TMEM179Q6ZVK1 233 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 CATIPQ7Z7H3 387 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ZFPM1Q8IX07 1006 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 RASEFQ8IZ41 740 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 KCNB2Q92953 911 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 CCDC102AQ96A19 550 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ZSCAN31Q96LW9 406 aaPredicted RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 TTC14Q96N46 770 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 WRNIP1Q96S55 665 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 FEZ1Q99689 392 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 GLIS2Q9BZE0 524 aaPredicted RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 UPF3BQ9BZI7 483 aaKnown RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 KANSL2Q9H9L4 492 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 AS3MTQ9HBK9 375 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ARHGEF10LQ9HCE6 1279 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 MTMR10Q9NXD2 777 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 ZSWIM5Q9P217 1185 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 PGAP2Q9UHJ9 254 aa8.15□□□□□ -1.1
UBR4-214ENST00000486515 SCAF8Q9UPN6 1271 aaKnown RBP8.15□□□□□ -1.1
UBR4-214ENST00000486515 HTTP42858 3142 aa8.15□□□□□ -1.11
UBR4-214ENST00000486515 CDK5RAP2Q96SN8 1893 aa8.15□□□□□ -1.11
UBR4-214ENST00000486515 ROBO3Q96MS0 1386 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 NEDD4P46934 1319 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 DHX16O60231 1041 aaKnown RBP8.14□□□□□ -1.11
UBR4-214ENST00000486515 CTNND1O60716 968 aaKnown RBP8.14□□□□□ -1.11
UBR4-214ENST00000486515 TTLL1O95922 423 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 CALM1P0DP23 149 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 CALM2P0DP24 149 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 CALM3P0DP25 149 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 FKBP1BP68106 108 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 ADCK5Q3MIX3 580 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 FAM47AQ5JRC9 791 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 NBPF12Q5TAG4 269 aaPredicted RBP8.14□□□□□ -1.11
UBR4-214ENST00000486515 PRAMEF18Q5VWM3 479 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 GPR153Q6NV75 609 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 DGKHQ86XP1 1220 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 ANKRD13AQ8IZ07 590 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 CDCA5Q96FF9 252 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 ZKSCAN3Q9BRR0 538 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 ANGEL1Q9UNK9 670 aaKnown RBP8.14□□□□□ -1.11
UBR4-214ENST00000486515 SLC12A7Q9Y666 1083 aa8.14□□□□□ -1.11
UBR4-214ENST00000486515 MYH2Q9UKX2 1941 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 CENPFP49454 3210 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 TNKSO95271 1327 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 CCDC196A0A1B0GTZ2 297 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 FAM196BA6NMK8 535 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 CPLX1O14810 134 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 GDF11O95390 407 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 GH2P01242 217 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 FGRP09769 529 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 RASA1P20936 1047 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 KIF5BP33176 963 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 CAP2P40123 477 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 MAP3K9P80192 1104 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms