RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
HMG20B-211ENST00000486028 BAZ2AQ9UIF9 1905 aaKnown RBP14.84□□□□□ -0.03
HMG20B-211ENST00000486028 CASP8AP2Q9UKL3 1982 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 SMIM22K7EJ46 135 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 TLR2O60603 784 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 GSPT1P15170 499 aaKnown RBP14.84□□□□□ -0.03
HMG20B-211ENST00000486028 PABPC4Q13310 644 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMG20B-211ENST00000486028 SEPT2Q15019 361 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 ALX1Q15699 326 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 USP17L2Q6R6M4 530 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 CWC27Q6UX04 472 aaKnown RBP14.84□□□□□ -0.03
HMG20B-211ENST00000486028 FEZ1Q99689 392 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 CCDC171Q6TFL3 1326 aa14.84□□□□□ -0.03
HMG20B-211ENST00000486028 AKR1B1P15121 316 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 GUCY1A2P33402 732 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 SP3Q02447 781 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 VPS53Q5VIR6 699 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 STK11IPQ8N1F8 1099 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 ERO1AQ96HE7 468 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 PNMA3Q9UL41 463 aa14.83□□□□□ -0.04
HMG20B-211ENST00000486028 FOXP2O15409 715 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 HSPD1P10809 573 aaKnown RBP14.82□□□□□ -0.04
HMG20B-211ENST00000486028 OSBPP22059 807 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 USP14P54578 494 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 PDE4BQ07343 736 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 PPARAQ07869 468 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ARHGEF6Q15052 776 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 TREML2Q5T2D2 321 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ZNF589Q86UQ0 364 aaPredicted RBP14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ZNF444Q8N0Y2 327 aaPredicted RBP14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ACER1Q8TDN7 264 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 KIAA1683Q9H0B3 1180 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 PHIPQ8WWQ0 1821 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ATAD5Q96QE3 1844 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 ROBO3Q96MS0 1386 aa14.82□□□□□ -0.04
HMG20B-211ENST00000486028 FGAP02671 866 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 CYP2C8P10632 490 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 DGKZQ13574 1117 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 C17orf99Q6UX52 265 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 SMCR8Q8TEV9 937 aaPredicted RBP14.81□□□□□ -0.04
HMG20B-211ENST00000486028 RUFY2Q8WXA3 655 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 KANSL2Q9H9L4 492 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 ARHGEF10LQ9HCE6 1279 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 EMILIN3Q9NT22 766 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 CPA4Q9UI42 421 aa14.81□□□□□ -0.04
HMG20B-211ENST00000486028 RASA1P20936 1047 aa14.8□□□□□ -0.04
HMG20B-211ENST00000486028 HOXA7P31268 230 aaPredicted RBP14.8□□□□□ -0.04
HMG20B-211ENST00000486028 ICA1Q05084 483 aa14.8□□□□□ -0.04
HMG20B-211ENST00000486028 KIF22Q14807 665 aa14.8□□□□□ -0.04
HMG20B-211ENST00000486028 ZYXQ15942 572 aaKnown RBP14.8□□□□□ -0.04
HMG20B-211ENST00000486028 PKN2Q16513 984 aaKnown RBP14.8□□□□□ -0.04
HMG20B-211ENST00000486028 C12orf42Q96LP6 360 aa14.8□□□□□ -0.04
HMG20B-211ENST00000486028 SH2D4AQ9H788 454 aa14.8□□□□□ -0.04
HMG20B-211ENST00000486028 ANAPC4Q9UJX5 808 aa14.8□□□□□ -0.04
HMG20B-211ENST00000486028 PRDM1O75626 825 aa14.79□□□□□ -0.04
HMG20B-211ENST00000486028 CHMLP26374 656 aa14.79□□□□□ -0.04
HMG20B-211ENST00000486028 IRX3P78415 501 aaPredicted RBP14.79□□□□□ -0.04
HMG20B-211ENST00000486028 CD99L2Q8TCZ2 262 aa14.79□□□□□ -0.04
HMG20B-211ENST00000486028 ADGRA2Q96PE1 1338 aa14.79□□□□□ -0.04
HMG20B-211ENST00000486028 MCOLN1Q9GZU1 580 aa14.79□□□□□ -0.04
HMG20B-211ENST00000486028 ASCC2Q9H1I8 757 aaPredicted RBP14.79□□□□□ -0.04
HMG20B-211ENST00000486028 PPP4R2Q9NY27 417 aa14.79□□□□□ -0.04
HMG20B-211ENST00000486028 ZMYM6O95789 1325 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 A0A1W2PRG0 241 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L15C9J2P7 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L13C9JLJ4 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L11C9JVI0 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L18D6R9N7 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L22D6RA61 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L17D6RBQ6 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L19D6RCP7 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L20D6RJB6 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 GCLCP48506 637 aaPredicted RBP14.78□□□□□ -0.04
HMG20B-211ENST00000486028 ATP2B2Q01814 1243 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 USP17L24Q0WX57 530 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 SIAH1Q8IUQ4 282 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.78□□□□□ -0.04
HMG20B-211ENST00000486028 EFCC1Q9HA90 598 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 CTNNA3Q9UI47 895 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 TMX2Q9Y320 296 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 PTPRFP10586 1907 aa14.78□□□□□ -0.04
HMG20B-211ENST00000486028 RAD50Q92878 1312 aa14.77□□□□□ -0.04
HMG20B-211ENST00000486028 TSPY3P0CV98 308 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 TSPY8P0CW00 308 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 BCRP11274 1271 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 EEF2P13639 858 aaKnown RBP14.77□□□□□ -0.05
HMG20B-211ENST00000486028 LACTBP83111 547 aaPredicted RBP14.77□□□□□ -0.05
HMG20B-211ENST00000486028 TFAP4Q01664 338 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 NEDD1Q8NHV4 660 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 DSCC1Q9BVC3 393 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 TRIM17Q9Y577 477 aa14.77□□□□□ -0.05
HMG20B-211ENST00000486028 ZNF213O14771 459 aa14.76□□□□□ -0.05
HMG20B-211ENST00000486028 ORC4O43929 436 aa14.76□□□□□ -0.05
HMG20B-211ENST00000486028 VCAM1P19320 739 aa14.76□□□□□ -0.05
HMG20B-211ENST00000486028 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
HMG20B-211ENST00000486028 PPP4R3BQ5MIZ7 849 aa14.76□□□□□ -0.05
HMG20B-211ENST00000486028 OTOP1Q7RTM1 612 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms