RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 NBPF11Q86T75 865 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 SDR42E1Q8WUS8 393 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 EHD4Q9H223 541 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 MCM9Q9NXL9 1143 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 SRRDQ9UH36 339 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 MGAMO43451 1857 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 MYCP01106 439 aaPredicted RBP12.76□□□□□ -0.37
DDX56-212ENST00000485367 BACE1P56817 501 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 PDE4CQ08493 712 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 SH3D19Q5HYK7 790 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 CLEC17AQ6ZS10 378 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 SH3TC2Q8TF17 1288 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 PDE4DIPQ5VU43 2346 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 TNRC18O15417 2968 aaPredicted RBP12.75□□□□□ -0.37
DDX56-212ENST00000485367 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 USP17L10C9JJH3 530 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 PRKAB2O43741 272 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 CHGBP05060 677 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
DDX56-212ENST00000485367 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 ANKRD13CQ8N6S4 541 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 ZNF333Q96JL9 665 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 PPP1R9BQ96SB3 815 aa12.75□□□□□ -0.37
DDX56-212ENST00000485367 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 CYP2D6P10635 497 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 SHMT1P34896 483 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 ABCB5Q2M3G0 1257 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 DDX60LQ5H9U9 1706 aaKnown RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 EVX2Q03828 476 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 PRKCZQ05513 592 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 HS1BP3Q53T59 392 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
DDX56-212ENST00000485367 CABP5Q9NP86 173 aa12.74□□□□□ -0.37
DDX56-212ENST00000485367 TNPO2O14787 897 aaKnown RBP12.73□□□□□ -0.37
DDX56-212ENST00000485367 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
DDX56-212ENST00000485367 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
DDX56-212ENST00000485367 FEZ1Q99689 392 aa12.73□□□□□ -0.37
DDX56-212ENST00000485367 GABRQQ9UN88 632 aa12.73□□□□□ -0.37
DDX56-212ENST00000485367 CENPFP49454 3210 aa12.73□□□□□ -0.37
DDX56-212ENST00000485367 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
DDX56-212ENST00000485367 DOCK3Q8IZD9 2030 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
DDX56-212ENST00000485367 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
DDX56-212ENST00000485367 GABPAQ06546 454 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
DDX56-212ENST00000485367 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 P2RX7Q99572 595 aaKnown RBP12.72□□□□□ -0.37
DDX56-212ENST00000485367 EMILIN3Q9NT22 766 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 SLC4A4Q9Y6R1 1079 aa12.72□□□□□ -0.37
DDX56-212ENST00000485367 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
DDX56-212ENST00000485367 GRK4P32298 578 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.71□□□□□ -0.37
DDX56-212ENST00000485367 ZSCAN30Q86W11 494 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 AMOTL1Q8IY63 956 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 ACER1Q8TDN7 264 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.37
DDX56-212ENST00000485367 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
DDX56-212ENST00000485367 BIN2Q9UBW5 565 aaPredicted RBP12.71□□□□□ -0.37
DDX56-212ENST00000485367 MYH8P13535 1937 aa12.71□□□□□ -0.37
DDX56-212ENST00000485367 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 FLT3LGP49771 235 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 NUCB1Q02818 461 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 SEPT2Q15019 361 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 COA7Q96BR5 231 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.38
DDX56-212ENST00000485367 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 USP17L21D6R901 530 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 RNF113AO15541 343 aaKnown RBP12.7□□□□□ -0.38
DDX56-212ENST00000485367 ADCY3O60266 1144 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 USP14P54578 494 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 HERVK_113P62684 666 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 TTC41PQ6P2S7 1318 aa12.7□□□□□ -0.38
DDX56-212ENST00000485367 SMIM22K7EJ46 135 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 ERC2O15083 957 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 PEX10O60683 326 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms