RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 ZNF384Q8TF68 577 aa19.08■□□□□ 0.64
HDLBP-238ENST00000479894 SIL1Q9H173 461 aa19.08■□□□□ 0.64
HDLBP-238ENST00000479894 ADORA1P30542 326 aa19.07■□□□□ 0.64
HDLBP-238ENST00000479894 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
HDLBP-238ENST00000479894 RRP1P56182 461 aaKnown RBP19.07■□□□□ 0.64
HDLBP-238ENST00000479894 GRB14Q14449 540 aa19.07■□□□□ 0.64
HDLBP-238ENST00000479894 GJC2Q5T442 439 aaPredicted RBP19.07■□□□□ 0.64
HDLBP-238ENST00000479894 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
HDLBP-238ENST00000479894 RNPC3Q96LT9 517 aaKnown RBP19.07■□□□□ 0.64
HDLBP-238ENST00000479894 SMCHD1A6NHR9 2005 aa19.07■□□□□ 0.64
HDLBP-238ENST00000479894 CYBAP13498 195 aa19.06■□□□□ 0.64
HDLBP-238ENST00000479894 GRIN2CQ14957 1233 aa19.06■□□□□ 0.64
HDLBP-238ENST00000479894 TRIM60Q495X7 471 aa19.06■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
HDLBP-238ENST00000479894 METTL16Q86W50 562 aaKnown RBP19.06■□□□□ 0.64
HDLBP-238ENST00000479894 NSUN4Q96CB9 384 aaKnown RBP19.06■□□□□ 0.64
HDLBP-238ENST00000479894 IVNS1ABPQ9Y6Y0 642 aa19.06■□□□□ 0.64
HDLBP-238ENST00000479894 TRIM43BA6NCK2 446 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 FOXP4Q8IVH2 680 aaPredicted RBP19.05■□□□□ 0.64
HDLBP-238ENST00000479894 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 TEX11Q8IYF3 940 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 TRPV1Q8NER1 839 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 TRIM43Q96BQ3 446 aaPredicted RBP19.05■□□□□ 0.64
HDLBP-238ENST00000479894 C12orf42Q96LP6 360 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 EMILIN3Q9NT22 766 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 DDX19BQ9UMR2 479 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 TACC3Q9Y6A5 838 aa19.05■□□□□ 0.64
HDLBP-238ENST00000479894 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.04■□□□□ 0.64
HDLBP-238ENST00000479894 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.04■□□□□ 0.64
HDLBP-238ENST00000479894 CNMDO75829 334 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 DNAJB2P25686 324 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 CYP2C19P33261 490 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 OLFML2BQ68BL8 750 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 LBX2Q6XYB7 198 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 SH3RF1Q7Z6J0 888 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 NPLOC4Q8TAT6 608 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 ASB2Q96Q27 587 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
HDLBP-238ENST00000479894 ZNFX1Q9P2E3 1918 aaKnown RBP19.04■□□□□ 0.64
HDLBP-238ENST00000479894 PLXNA1Q9UIW2 1896 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L15C9J2P7 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L13C9JLJ4 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L11C9JVI0 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L18D6R9N7 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L22D6RA61 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L17D6RBQ6 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L19D6RCP7 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L20D6RJB6 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 UBTFL1P0CB47 393 aaPredicted RBP19.03■□□□□ 0.64
HDLBP-238ENST00000479894 JAG1P78504 1218 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 USP17L24Q0WX57 530 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 MAP3K12Q12852 859 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 AAMPQ13685 434 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 MVPQ14764 893 aaKnown RBP19.03■□□□□ 0.64
HDLBP-238ENST00000479894 TMEM57Q8N5G2 664 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 ZNF576Q9H609 170 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 DNAJC18Q9H819 358 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 THEGQ9P2T0 379 aa19.03■□□□□ 0.64
HDLBP-238ENST00000479894 ARIH1Q9Y4X5 557 aaPredicted RBP19.03■□□□□ 0.64
HDLBP-238ENST00000479894 SEPT4O43236 478 aa19.02■□□□□ 0.64
HDLBP-238ENST00000479894 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.64
HDLBP-238ENST00000479894 WDR78Q5VTH9 848 aa19.02■□□□□ 0.64
HDLBP-238ENST00000479894 COPRSQ9NQ92 184 aa19.02■□□□□ 0.64
HDLBP-238ENST00000479894 SUPT16HQ9Y5B9 1047 aaKnown RBP19.02■□□□□ 0.64
HDLBP-238ENST00000479894 MYH1P12882 1939 aa19.02■□□□□ 0.63
HDLBP-238ENST00000479894 TIMM10P62072 90 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 ADAMTS19Q8TE59 1207 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 XAGE2Q96GT9 111 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 GAS2L1Q99501 681 aaPredicted RBP19.01■□□□□ 0.63
HDLBP-238ENST00000479894 NOL10Q9BSC4 688 aaKnown RBP19.01■□□□□ 0.63
HDLBP-238ENST00000479894 TRIM34Q9BYJ4 488 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 AKAP2Q9Y2D5 859 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 NDUFB9Q9Y6M9 179 aa19.01■□□□□ 0.63
HDLBP-238ENST00000479894 A0A1B0GUL7 405 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 KIAA0355O15063 1070 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 GDF11O95390 407 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 CLTBP09497 229 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 PLCG2P16885 1265 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 EPHB4P54760 987 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 MRPS5P82675 430 aaKnown RBP19■□□□□ 0.63
HDLBP-238ENST00000479894 TLE2Q04725 743 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 CRACR2BQ8N4Y2 399 aaPredicted RBP19■□□□□ 0.63
HDLBP-238ENST00000479894 PANK1Q8TE04 598 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 UHRF1Q96T88 793 aaPredicted RBP19■□□□□ 0.63
HDLBP-238ENST00000479894 HMG20BQ9P0W2 317 aa19■□□□□ 0.63
HDLBP-238ENST00000479894 TCF20Q9UGU0 1960 aaKnown RBP19■□□□□ 0.63
HDLBP-238ENST00000479894 STRNO43815 780 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 BAG3O95817 575 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 ITGB8P26012 769 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 ADCYAP1R1P41586 468 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 USP14P54578 494 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 FPGSQ05932 587 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 LRRC41Q15345 812 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 DPP9Q86TI2 863 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 SPATA5Q8NB90 893 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 SH3RF3Q8TEJ3 882 aaPredicted RBP18.99■□□□□ 0.63
HDLBP-238ENST00000479894 TIFAQ96CG3 184 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 C1QTNF1Q9BXJ1 281 aa18.99■□□□□ 0.63
HDLBP-238ENST00000479894 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms