RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 TLR2O60603 784 aa28.57■■■□□ 2.16
ARF1-208ENST00000478336 FKTNO75072 461 aa28.57■■■□□ 2.16
ARF1-208ENST00000478336 STK11IPQ8N1F8 1099 aa28.57■■■□□ 2.16
ARF1-208ENST00000478336 PARK7Q99497 189 aaKnown RBP28.57■■■□□ 2.16
ARF1-208ENST00000478336 FGAP02671 866 aa28.56■■■□□ 2.16
ARF1-208ENST00000478336 ACER1Q8TDN7 264 aa28.56■■■□□ 2.16
ARF1-208ENST00000478336 KIAA1683Q9H0B3 1180 aa28.56■■■□□ 2.16
ARF1-208ENST00000478336 IL25Q9H293 177 aa28.56■■■□□ 2.16
ARF1-208ENST00000478336 MKNK2Q9HBH9 465 aa28.56■■■□□ 2.16
ARF1-208ENST00000478336 RAD50Q92878 1312 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 CHMLP26374 656 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 C12orf42Q96LP6 360 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 FEZ1Q99689 392 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.55■■■□□ 2.16
ARF1-208ENST00000478336 ZNF287Q9HBT7 754 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 EMILIN3Q9NT22 766 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 TMOD4Q9NZQ9 345 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 ANAPC4Q9UJX5 808 aa28.55■■■□□ 2.16
ARF1-208ENST00000478336 SLC3A2P08195 630 aaKnown RBP28.54■■■□□ 2.16
ARF1-208ENST00000478336 CYP2C8P10632 490 aa28.54■■■□□ 2.16
ARF1-208ENST00000478336 USP17L2Q6R6M4 530 aa28.54■■■□□ 2.16
ARF1-208ENST00000478336 CLEC10AQ8IUN9 316 aa28.54■■■□□ 2.16
ARF1-208ENST00000478336 PPP4R2Q9NY27 417 aa28.54■■■□□ 2.16
ARF1-208ENST00000478336 A0A1W2PRG0 241 aa28.53■■■□□ 2.16
ARF1-208ENST00000478336 PRDM1O75626 825 aa28.53■■■□□ 2.16
ARF1-208ENST00000478336 ICA1Q05084 483 aa28.53■■■□□ 2.16
ARF1-208ENST00000478336 SIAH1Q8IUQ4 282 aa28.53■■■□□ 2.16
ARF1-208ENST00000478336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.53■■■□□ 2.16
ARF1-208ENST00000478336 USP14P54578 494 aa28.52■■■□□ 2.16
ARF1-208ENST00000478336 SP3Q02447 781 aa28.52■■■□□ 2.16
ARF1-208ENST00000478336 PDE4BQ07343 736 aa28.52■■■□□ 2.16
ARF1-208ENST00000478336 BMP2KLQ5H9B9 411 aa28.52■■■□□ 2.16
ARF1-208ENST00000478336 C17orf99Q6UX52 265 aa28.52■■■□□ 2.16
ARF1-208ENST00000478336 PNMA3Q9UL41 463 aa28.52■■■□□ 2.16
ARF1-208ENST00000478336 LAMA4Q16363 1823 aa28.51■■■□□ 2.15
ARF1-208ENST00000478336 CTDSPL2Q05D32 466 aa28.51■■■□□ 2.15
ARF1-208ENST00000478336 PABPC4Q13310 644 aaKnown RBP eCLIP28.51■■■□□ 2.15
ARF1-208ENST00000478336 ZYXQ15942 572 aaKnown RBP28.51■■■□□ 2.15
ARF1-208ENST00000478336 KANSL2Q9H9L4 492 aa28.51■■■□□ 2.15
ARF1-208ENST00000478336 PLIN4Q96Q06 1357 aa28.5■■■□□ 2.15
ARF1-208ENST00000478336 HOXA7P31268 230 aaPredicted RBP28.5■■■□□ 2.15
ARF1-208ENST00000478336 ZNF444Q8N0Y2 327 aaPredicted RBP28.5■■■□□ 2.15
ARF1-208ENST00000478336 RUFY2Q8WXA3 655 aa28.5■■■□□ 2.15
ARF1-208ENST00000478336 DSCC1Q9BVC3 393 aa28.5■■■□□ 2.15
ARF1-208ENST00000478336 ARHGEF10LQ9HCE6 1279 aa28.5■■■□□ 2.15
ARF1-208ENST00000478336 CPA4Q9UI42 421 aa28.5■■■□□ 2.15
ARF1-208ENST00000478336 TACC3Q9Y6A5 838 aa28.5■■■□□ 2.15
ARF1-208ENST00000478336 FGRP09769 529 aa28.49■■■□□ 2.15
ARF1-208ENST00000478336 CTU1Q7Z7A3 348 aaKnown RBP28.49■■■□□ 2.15
ARF1-208ENST00000478336 TNS4Q8IZW8 715 aa28.49■■■□□ 2.15
ARF1-208ENST00000478336 ERO1AQ96HE7 468 aa28.49■■■□□ 2.15
ARF1-208ENST00000478336 ASCC2Q9H1I8 757 aaPredicted RBP28.49■■■□□ 2.15
ARF1-208ENST00000478336 TMX2Q9Y320 296 aa28.49■■■□□ 2.15
ARF1-208ENST00000478336 IGKV6D-41A0A0C4DH26 115 aa28.48■■■□□ 2.15
ARF1-208ENST00000478336 BCRP11274 1271 aa28.48■■■□□ 2.15
ARF1-208ENST00000478336 VCAM1P19320 739 aa28.48■■■□□ 2.15
ARF1-208ENST00000478336 ORC4O43929 436 aa28.47■■■□□ 2.15
ARF1-208ENST00000478336 EEF2P13639 858 aaKnown RBP28.47■■■□□ 2.15
ARF1-208ENST00000478336 OSBPP22059 807 aa28.47■■■□□ 2.15
ARF1-208ENST00000478336 CD99L2Q8TCZ2 262 aa28.47■■■□□ 2.15
ARF1-208ENST00000478336 SMCR8Q8TEV9 937 aaPredicted RBP28.47■■■□□ 2.15
ARF1-208ENST00000478336 NBPF3Q9H094 633 aa28.47■■■□□ 2.15
ARF1-208ENST00000478336 SH2D4AQ9H788 454 aa28.47■■■□□ 2.15
ARF1-208ENST00000478336 INCENPQ9NQS7 918 aa28.47■■■□□ 2.15
ARF1-208ENST00000478336 SGSM2O43147 1006 aa28.46■■■□□ 2.15
ARF1-208ENST00000478336 CAP1Q01518 475 aa28.46■■■□□ 2.15
ARF1-208ENST00000478336 NEDD1Q8NHV4 660 aa28.46■■■□□ 2.15
ARF1-208ENST00000478336 HAND2P61296 217 aa28.45■■■□□ 2.14
ARF1-208ENST00000478336 IRX3P78415 501 aaPredicted RBP28.45■■■□□ 2.14
ARF1-208ENST00000478336 ZSWIM8A7E2V4 1837 aa28.45■■■□□ 2.14
ARF1-208ENST00000478336 TSPY3P0CV98 308 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 TSPY8P0CW00 308 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 LACTBP83111 547 aaPredicted RBP28.44■■■□□ 2.14
ARF1-208ENST00000478336 TFAP4Q01664 338 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 FAM47AQ5JRC9 791 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 KIAA1755Q5JYT7 1200 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 TBC1D10CQ8IV04 446 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 MCOLN1Q9GZU1 580 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 VCPKMTQ9H867 229 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 NYAP2Q9P242 653 aa28.44■■■□□ 2.14
ARF1-208ENST00000478336 USP17L15C9J2P7 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L13C9JLJ4 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L11C9JVI0 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L18D6R9N7 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L22D6RA61 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L17D6RBQ6 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L19D6RCP7 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L20D6RJB6 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 GCLCP48506 637 aaPredicted RBP28.43■■■□□ 2.14
ARF1-208ENST00000478336 ATP2B2Q01814 1243 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 USP17L24Q0WX57 530 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 STAG1Q8WVM7 1258 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 LPAR1Q92633 364 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 CEP95Q96GE4 821 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 MYH4Q9Y623 1939 aa28.43■■■□□ 2.14
ARF1-208ENST00000478336 PCP11498 1178 aaKnown RBP28.42■■■□□ 2.14
ARF1-208ENST00000478336 AKNAD1Q5T1N1 836 aa28.42■■■□□ 2.14
ARF1-208ENST00000478336 CATSPERGQ6ZRH7 1159 aa28.42■■■□□ 2.14
ARF1-208ENST00000478336 OTOP1Q7RTM1 612 aa28.42■■■□□ 2.14
ARF1-208ENST00000478336 P2RX7Q99572 595 aaKnown RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms