RNA–Protein interactions for RNA: ENST00000477127.5

CCNL1-219, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-219ENST00000477127 GINM1Q9NU53 330 aa16.35■□□□□ 0.21
CCNL1-219ENST00000477127 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
CCNL1-219ENST00000477127 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 ASNSP08243 561 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 HSPA4P34932 840 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 HMGCS2P54868 508 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 PPP4CP60510 307 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 TTC39AQ5SRH9 613 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-219ENST00000477127 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-219ENST00000477127 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 PAK6Q9NQU5 681 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-219ENST00000477127 PHIPQ8WWQ0 1821 aa16.34■□□□□ 0.21
CCNL1-219ENST00000477127 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.2
CCNL1-219ENST00000477127 DEFB118Q96PH6 123 aa16.33■□□□□ 0.2
CCNL1-219ENST00000477127 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
CCNL1-219ENST00000477127 PTPRFP10586 1907 aa16.33■□□□□ 0.2
CCNL1-219ENST00000477127 C19orf81C9J6K1 198 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 TNNI3KQ59H18 835 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
CCNL1-219ENST00000477127 CERS3Q8IU89 383 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
CCNL1-219ENST00000477127 EAF2Q96CJ1 260 aaPredicted RBP16.32■□□□□ 0.2
CCNL1-219ENST00000477127 CRISPLD2Q9H0B8 497 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 DIAPH3Q9NSV4 1193 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCNL1-219ENST00000477127 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
CCNL1-219ENST00000477127 TAOK2Q9UL54 1235 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 FPGT-TNNI3KV9GXZ4 949 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 RAD50Q92878 1312 aa16.32■□□□□ 0.2
CCNL1-219ENST00000477127 EVI5O60447 810 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 HMGCRP04035 888 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
CCNL1-219ENST00000477127 NEK4P51957 841 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 BACE1P56817 501 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 CRACR2BQ8N4Y2 399 aaPredicted RBP16.31■□□□□ 0.2
CCNL1-219ENST00000477127 ANKLE1Q8NAG6 615 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 RNF39Q9H2S5 420 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
CCNL1-219ENST00000477127 A0A1W2PPC1 479 aa16.3■□□□□ 0.2
CCNL1-219ENST00000477127 IRX3P78415 501 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-219ENST00000477127 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-219ENST00000477127 TICAM2Q86XR7 235 aa16.3■□□□□ 0.2
CCNL1-219ENST00000477127 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
CCNL1-219ENST00000477127 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
CCNL1-219ENST00000477127 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-219ENST00000477127 HLA-DOAP06340 250 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
CCNL1-219ENST00000477127 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-219ENST00000477127 NECAB2Q7Z6G3 386 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 INTS4Q96HW7 963 aaKnown RBP16.29■□□□□ 0.2
CCNL1-219ENST00000477127 DBNDD2Q9BQY9 259 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.29■□□□□ 0.28e-7■■■□□ 19.1
CCNL1-219ENST00000477127 PRO3102Q9H379 93 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-219ENST00000477127 SNRKQ9NRH2 765 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 FLT1P17948 1338 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 MTMR2Q13614 643 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 CUL4AQ13619 759 aa16.29■□□□□ 0.2
CCNL1-219ENST00000477127 GTF3C2Q8WUA4 911 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-219ENST00000477127 TRAK2O60296 914 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 ATP5JP18859 108 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 TRMT44Q8IYL2 757 aaKnown RBP16.28■□□□□ 0.2
CCNL1-219ENST00000477127 GPRC5AQ8NFJ5 357 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 SOCS4Q8WXH5 440 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 KCNB2Q92953 911 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 PAWRQ96IZ0 340 aaKnown RBP16.28■□□□□ 0.2
CCNL1-219ENST00000477127 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
CCNL1-219ENST00000477127 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
CCNL1-219ENST00000477127 XRCC5P13010 732 aaKnown RBP16.27■□□□□ 0.19
CCNL1-219ENST00000477127 ZAP70P43403 619 aa16.27■□□□□ 0.19
CCNL1-219ENST00000477127 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.19
CCNL1-219ENST00000477127 NUDT12Q9BQG2 462 aa16.27■□□□□ 0.19
CCNL1-219ENST00000477127 DNAJC18Q9H819 358 aa16.27■□□□□ 0.19
CCNL1-219ENST00000477127 MAPK4P31152 587 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 HERVK_113P62684 666 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
CCNL1-219ENST00000477127 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 ATAD5Q96QE3 1844 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
CCNL1-219ENST00000477127 CYP7A1P22680 504 aa16.25■□□□□ 0.19
CCNL1-219ENST00000477127 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
CCNL1-219ENST00000477127 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
CCNL1-219ENST00000477127 NBPF3Q9H094 633 aa16.25■□□□□ 0.19
CCNL1-219ENST00000477127 IL25Q9H293 177 aa16.25■□□□□ 0.19
CCNL1-219ENST00000477127 L1TD1Q5T7N2 865 aaKnown RBP16.24■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L2Q6R6M4 530 aa16.24■□□□□ 0.19
CCNL1-219ENST00000477127 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
CCNL1-219ENST00000477127 DBNLQ9UJU6 430 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms