RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 CTNNA3Q9UI47 895 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMIM4-202ENST00000476842 SLC45A1Q9Y2W3 748 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 ZNF213O14771 459 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 NOM1Q5C9Z4 860 aaKnown RBP21.14■□□□□ 0.97
SMIM4-202ENST00000476842 USP17L2Q6R6M4 530 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 ACER1Q8TDN7 264 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 KIAA1683Q9H0B3 1180 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 R3HDMLQ9H3Y0 253 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 ZFYVE28Q9HCC9 887 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 INCENPQ9NQS7 918 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 PRDM10Q9NQV6 1147 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 TMOD4Q9NZQ9 345 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 AGTPBP1Q9UPW5 1226 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 TACC3Q9Y6A5 838 aa21.14■□□□□ 0.97
SMIM4-202ENST00000476842 ORC4O43929 436 aa21.13■□□□□ 0.97
SMIM4-202ENST00000476842 USP14P54578 494 aa21.13■□□□□ 0.97
SMIM4-202ENST00000476842 CRHR2Q13324 411 aa21.13■□□□□ 0.97
SMIM4-202ENST00000476842 TAF1CQ15572 869 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-202ENST00000476842 ESYT1Q9BSJ8 1104 aa21.13■□□□□ 0.97
SMIM4-202ENST00000476842 EMILIN3Q9NT22 766 aa21.13■□□□□ 0.97
SMIM4-202ENST00000476842 LAMB1P07942 1786 aa21.13■□□□□ 0.97
SMIM4-202ENST00000476842 A0A1W2PRG0 241 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 CDC45O75419 566 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 PCP11498 1178 aaKnown RBP21.12■□□□□ 0.97
SMIM4-202ENST00000476842 HAND2P61296 217 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 PTH1RQ03431 593 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 ICA1Q05084 483 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 TREML2Q5T2D2 321 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 NEDD1Q8NHV4 660 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 C12orf42Q96LP6 360 aa21.12■□□□□ 0.97
SMIM4-202ENST00000476842 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 GPR25O00155 361 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 TFAP4Q01664 338 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 PABPC4Q13310 644 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMIM4-202ENST00000476842 DGKZQ13574 1117 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 IMMTQ16891 758 aaKnown RBP21.11■□□□□ 0.97
SMIM4-202ENST00000476842 AKNAD1Q5T1N1 836 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 CASC1Q6TDU7 716 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 STAG1Q8WVM7 1258 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 MAP4K1Q92918 833 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 FEZ1Q99689 392 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 NBPF3Q9H094 633 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 ARHGEF10LQ9HCE6 1279 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 TMX2Q9Y320 296 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 PHIPQ8WWQ0 1821 aa21.11■□□□□ 0.97
SMIM4-202ENST00000476842 TLR2O60603 784 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 TSPY3P0CV98 308 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 TSPY8P0CW00 308 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 EEF2P13639 858 aaKnown RBP21.1■□□□□ 0.97
SMIM4-202ENST00000476842 HOXA7P31268 230 aaPredicted RBP21.1■□□□□ 0.97
SMIM4-202ENST00000476842 FAM47AQ5JRC9 791 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 MFSD6Q6ZSS7 791 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 KIAA1211Q6ZU35 1233 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 RNF41Q9H4P4 317 aaPredicted RBP21.1■□□□□ 0.97
SMIM4-202ENST00000476842 SH2D4AQ9H788 454 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 NYAP2Q9P242 653 aa21.1■□□□□ 0.97
SMIM4-202ENST00000476842 U3KPZ7 1027 aaPredicted RBP21.1■□□□□ 0.97
SMIM4-202ENST00000476842 ZYXQ15942 572 aaKnown RBP21.09■□□□□ 0.97
SMIM4-202ENST00000476842 CLEC10AQ8IUN9 316 aa21.09■□□□□ 0.97
SMIM4-202ENST00000476842 TBC1D10CQ8IV04 446 aa21.09■□□□□ 0.97
SMIM4-202ENST00000476842 PARK7Q99497 189 aaKnown RBP21.09■□□□□ 0.97
SMIM4-202ENST00000476842 MTMR4Q9NYA4 1195 aa21.09■□□□□ 0.97
SMIM4-202ENST00000476842 RANBP6O60518 1105 aaKnown RBP21.08■□□□□ 0.97
SMIM4-202ENST00000476842 OSBPP22059 807 aa21.08■□□□□ 0.97
SMIM4-202ENST00000476842 NT5C2P49902 561 aa21.08■□□□□ 0.97
SMIM4-202ENST00000476842 MKL1Q969V6 931 aa21.08■□□□□ 0.97
SMIM4-202ENST00000476842 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.97
SMIM4-202ENST00000476842 PNMA3Q9UL41 463 aa21.08■□□□□ 0.97
SMIM4-202ENST00000476842 ATAD5Q96QE3 1844 aa21.08■□□□□ 0.96
SMIM4-202ENST00000476842 TSPY2A6NKD2 308 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 CYP2C8P10632 490 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 ATP2B2Q01814 1243 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 C17orf99Q6UX52 265 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 ZNF296Q8WUU4 475 aaPredicted RBP21.07■□□□□ 0.96
SMIM4-202ENST00000476842 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 VCPKMTQ9H867 229 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 TOMM22Q9NS69 142 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 CLIP2Q9UDT6 1046 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
SMIM4-202ENST00000476842 FKTNO75072 461 aa21.06■□□□□ 0.96
SMIM4-202ENST00000476842 TTLL1O95922 423 aa21.06■□□□□ 0.96
SMIM4-202ENST00000476842 RRP12Q5JTH9 1297 aaKnown RBP21.06■□□□□ 0.96
SMIM4-202ENST00000476842 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
SMIM4-202ENST00000476842 LPAR1Q92633 364 aa21.06■□□□□ 0.96
SMIM4-202ENST00000476842 ASCC2Q9H1I8 757 aaPredicted RBP21.06■□□□□ 0.96
SMIM4-202ENST00000476842 IL17RBQ9NRM6 502 aa21.06■□□□□ 0.96
SMIM4-202ENST00000476842 TCP11L1Q9NUJ3 509 aa21.06■□□□□ 0.96
SMIM4-202ENST00000476842 ADGRA2Q96PE1 1338 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L15C9J2P7 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L13C9JLJ4 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L11C9JVI0 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L18D6R9N7 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L22D6RA61 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L17D6RBQ6 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L19D6RCP7 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L20D6RJB6 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 VCAM1P19320 739 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 SP3Q02447 781 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 USP17L24Q0WX57 530 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms