RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 ZYXQ15942 572 aaKnown RBP17.92■□□□□ 0.46
DFFA-203ENST00000476658 SH3D19Q5HYK7 790 aa17.92■□□□□ 0.46
DFFA-203ENST00000476658 HSPD1P10809 573 aaKnown RBP17.91■□□□□ 0.46
DFFA-203ENST00000476658 SP3Q02447 781 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.46
DFFA-203ENST00000476658 USP17L2Q6R6M4 530 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 SKAP1Q86WV1 359 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 ACER1Q8TDN7 264 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 PNMA3Q9UL41 463 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 SLC45A1Q9Y2W3 748 aa17.91■□□□□ 0.46
DFFA-203ENST00000476658 PRDM1O75626 825 aa17.9■□□□□ 0.46
DFFA-203ENST00000476658 PDE4BQ07343 736 aa17.9■□□□□ 0.46
DFFA-203ENST00000476658 ALX1Q15699 326 aa17.9■□□□□ 0.46
DFFA-203ENST00000476658 CTU1Q7Z7A3 348 aaKnown RBP17.9■□□□□ 0.46
DFFA-203ENST00000476658 CLEC10AQ8IUN9 316 aa17.9■□□□□ 0.46
DFFA-203ENST00000476658 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
DFFA-203ENST00000476658 SMCR8Q8TEV9 937 aaPredicted RBP17.9■□□□□ 0.46
DFFA-203ENST00000476658 ERO1AQ96HE7 468 aa17.9■□□□□ 0.46
DFFA-203ENST00000476658 CPA4Q9UI42 421 aa17.9■□□□□ 0.46
DFFA-203ENST00000476658 GREB1LQ9C091 1923 aaPredicted RBP17.9■□□□□ 0.46
DFFA-203ENST00000476658 FGAP02671 866 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 RASA1P20936 1047 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 OSBPP22059 807 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 USP14P54578 494 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 ATP2B2Q01814 1243 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 ICA1Q05084 483 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 CTDSPL2Q05D32 466 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 CD99L2Q8TCZ2 262 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 KIAA1683Q9H0B3 1180 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 ARHGEF10LQ9HCE6 1279 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 EMILIN3Q9NT22 766 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 MYH4Q9Y623 1939 aa17.89■□□□□ 0.45
DFFA-203ENST00000476658 C17orf99Q6UX52 265 aa17.88■□□□□ 0.45
DFFA-203ENST00000476658 ADGRA2Q96PE1 1338 aa17.88■□□□□ 0.45
DFFA-203ENST00000476658 ZSWIM8A7E2V4 1837 aa17.88■□□□□ 0.45
DFFA-203ENST00000476658 LAMA4Q16363 1823 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 A0A1W2PRG0 241 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 CHMLP26374 656 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
DFFA-203ENST00000476658 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 RUFY2Q8WXA3 655 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 C12orf42Q96LP6 360 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 MCOLN1Q9GZU1 580 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
DFFA-203ENST00000476658 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 ZMYM6O95789 1325 aa17.87■□□□□ 0.45
DFFA-203ENST00000476658 MGAMO43451 1857 aa17.86■□□□□ 0.45
DFFA-203ENST00000476658 ECM2O94769 699 aaPredicted RBP17.86■□□□□ 0.45
DFFA-203ENST00000476658 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
DFFA-203ENST00000476658 HAND2P61296 217 aa17.86■□□□□ 0.45
DFFA-203ENST00000476658 KIF22Q14807 665 aa17.86■□□□□ 0.45
DFFA-203ENST00000476658 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
DFFA-203ENST00000476658 ANAPC4Q9UJX5 808 aa17.86■□□□□ 0.45
DFFA-203ENST00000476658 TRIM17Q9Y577 477 aa17.86■□□□□ 0.45
DFFA-203ENST00000476658 TSPY3P0CV98 308 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 TSPY8P0CW00 308 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 VCAM1P19320 739 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 HOXA7P31268 230 aaPredicted RBP17.85■□□□□ 0.45
DFFA-203ENST00000476658 ARHGEF6Q15052 776 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 FAM47AQ5JRC9 791 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 RAD50Q92878 1312 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.85■□□□□ 0.45
DFFA-203ENST00000476658 IL25Q9H293 177 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
DFFA-203ENST00000476658 USP17L15C9J2P7 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L13C9JLJ4 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L11C9JVI0 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L18D6R9N7 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L22D6RA61 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L17D6RBQ6 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L19D6RCP7 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L20D6RJB6 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 BCRP11274 1271 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 LACTBP83111 547 aaPredicted RBP17.84■□□□□ 0.45
DFFA-203ENST00000476658 TFAP4Q01664 338 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 USP17L24Q0WX57 530 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 OTOP1Q7RTM1 612 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 ANKRD13CQ8N6S4 541 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 DSCC1Q9BVC3 393 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 RPAP3Q9H6T3 665 aaPredicted RBP17.84■□□□□ 0.45
DFFA-203ENST00000476658 EFCC1Q9HA90 598 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.84■□□□□ 0.45
DFFA-203ENST00000476658 TMX2Q9Y320 296 aa17.84■□□□□ 0.45
DFFA-203ENST00000476658 TSPY2A6NKD2 308 aa17.83■□□□□ 0.44
DFFA-203ENST00000476658 RAD21O60216 631 aa17.83■□□□□ 0.44
DFFA-203ENST00000476658 RANBP6O60518 1105 aaKnown RBP17.83■□□□□ 0.44
DFFA-203ENST00000476658 GCLCP48506 637 aaPredicted RBP17.83■□□□□ 0.44
DFFA-203ENST00000476658 PKN2Q16513 984 aaKnown RBP17.83■□□□□ 0.44
DFFA-203ENST00000476658 BMP2KLQ5H9B9 411 aa17.83■□□□□ 0.44
DFFA-203ENST00000476658 RRP12Q5JTH9 1297 aaKnown RBP17.83■□□□□ 0.44
DFFA-203ENST00000476658 NEDD1Q8NHV4 660 aa17.83■□□□□ 0.44
DFFA-203ENST00000476658 P2RX7Q99572 595 aaKnown RBP17.83■□□□□ 0.44
DFFA-203ENST00000476658 ARHGAP39Q9C0H5 1083 aa17.83■□□□□ 0.44
DFFA-203ENST00000476658 VCPKMTQ9H867 229 aa17.83■□□□□ 0.44
DFFA-203ENST00000476658 ZNF213O14771 459 aa17.82■□□□□ 0.44
DFFA-203ENST00000476658 HERVK_113P62684 666 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms