RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 ATP2B2Q01814 1243 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 WTAPQ15007 396 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 UTP14CQ5TAP6 766 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 TAOK1Q7L7X3 1001 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 ARHGEF2Q92974 986 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 UTP14AQ9BVJ6 771 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 CLIC4Q9Y696 253 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 TACC3Q9Y6A5 838 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 MAST3O60307 1309 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 ACTN4O43707 911 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 UQCRFS1P1P0C7P4 283 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 KRT13P13646 458 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 ITGA6P23229 1130 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 LRRC23Q53EV4 343 aaPredicted RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 DNAJC10Q8IXB1 793 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 FBXO18Q8NFZ0 1043 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 GJB4Q9NTQ9 266 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 CEMIPQ8WUJ3 1361 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 ANKARQ7Z5J8 1434 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 RHOXF2BP0C7M4 288 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 AFMP43652 599 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 COG7P83436 770 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 FANCCQ00597 558 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 RASIP1Q5U651 963 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 VPS52Q8N1B4 723 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 RHOXF2Q9BQY4 288 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 EIF2AQ9BY44 585 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 AGLP35573 1532 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 CYP27B1O15528 508 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 RTN1Q16799 776 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 KRT40Q6A162 431 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 BICDL1Q6ZP65 573 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 ZNF215Q9UL58 517 aaPredicted RBP6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 SLC4A4Q9Y6R1 1079 aa6.81□□□□□ -1.32
HNRNPU-208ENST00000475997 IDEP14735 1019 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 MYL5Q02045 173 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 MUM1Q2TAK8 710 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 ZNF569Q5MCW4 686 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 IQCA1Q86XH1 822 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 MAGEB6Q8N7X4 407 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 PDCD7Q8N8D1 485 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 MIGA1Q8NAN2 632 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 CSRNP2Q9H175 543 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 ERCC3P19447 782 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 TCIRG1Q13488 830 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 IFT81Q8WYA0 676 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 BICD1Q96G01 975 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 KCNF1Q9H3M0 494 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 ITSN1Q15811 1721 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 RNF8O76064 485 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 PFKFB1P16118 471 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 CNGA1P29973 690 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 ELF2Q15723 593 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 ZKSCAN8Q15776 578 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 DPCR1Q3MIW9 517 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 CCDC170Q8IYT3 715 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 HVCN1Q96D96 273 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.8□□□□□ -1.326e-11■■■■□ 20.4
HNRNPU-208ENST00000475997 PCDH11XQ9BZA7 1347 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 PCDH11YQ9BZA8 1340 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 SPATA31D1Q6ZQQ2 1576 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 GOLGA6BA6NDN3 693 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 M0R2C6 588 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 WDHD1O75717 1129 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 MBD4O95243 580 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 NLRP12P59046 1061 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 CHMP4BP1P59074 171 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 MTMR3Q13615 1198 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 STOX1Q6ZVD7 989 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 GOLGA5Q8TBA6 731 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 STAG1Q8WVM7 1258 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 RPGRIP1Q96KN7 1286 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 SPTLC3Q9NUV7 552 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 EXOC1Q9NV70 894 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 PUF60Q9UHX1 559 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 KCNH3Q9ULD8 1083 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 ANKRD26Q9UPS8 1709 aa6.8□□□□□ -1.32
HNRNPU-208ENST00000475997 TXNDC9O14530 226 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 RNF40O75150 1001 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 STX17P56962 302 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 NLRP5P59047 1200 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 IFT20Q8IY31 132 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 GSDMBQ8TAX9 411 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 TTF2Q9UNY4 1162 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 SATB2Q9UPW6 733 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 AP5Z1O43299 807 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 CYP7A1P22680 504 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 PEX19P40855 299 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 NAA30Q147X3 362 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 INF2Q27J81 1249 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 CCDC144BQ3MJ40 725 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 TSGA10IPQ3SY00 556 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 AFAP1L2Q8N4X5 818 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 ZBTB9Q96C00 473 aa6.79□□□□□ -1.32
HNRNPU-208ENST00000475997 EPSTI1Q96J88 318 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms