RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ERVK-24P63145 666 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 POSTNQ15063 836 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 TRIML1Q8N9V2 468 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 HAUS7Q99871 368 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 PICK1Q9NRD5 415 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
ABCF1-205ENST00000475993 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
ABCF1-205ENST00000475993 ERCC5P28715 1186 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 SMTNP53814 917 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 AENQ8WTP8 325 aaKnown RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 SUDS3Q9H7L9 328 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 KLC4Q9NSK0 619 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 METP08581 1390 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 ENO4A6NNW6 628 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 NDUFAB1O14561 156 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 ZEB2O60315 1214 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 RASSF9O75901 435 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 PLCD1P51178 756 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 ACTN3Q08043 901 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 GSPT2Q8IYD1 628 aaKnown RBP11.88□□□□□ -0.51
ABCF1-205ENST00000475993 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 HELLSQ9NRZ9 838 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 ZMYM6O95789 1325 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 KDM3BQ7LBC6 1761 aa11.88□□□□□ -0.51
ABCF1-205ENST00000475993 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 NRXN3Q9Y4C0 1643 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 SLIT1O75093 1534 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 TECPR2O15040 1411 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 ITIH6Q6UXX5 1313 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 PYGLP06737 847 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 PLCB4Q15147 1175 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 ZNF827Q17R98 1081 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 CEP57Q86XR8 500 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 VPS37DQ86XT2 251 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 KBTBD3Q8NAB2 608 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 KDM4CQ9H3R0 1056 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
ABCF1-205ENST00000475993 FAM184BQ9ULE4 1060 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 ZMYND10O75800 440 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 TNNI3KQ59H18 835 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 PAPD7Q5XG87 772 aaKnown RBP11.87□□□□□ -0.51
ABCF1-205ENST00000475993 UBE3BQ7Z3V4 1068 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 FPGT-TNNI3KV9GXZ4 949 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
ABCF1-205ENST00000475993 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
ABCF1-205ENST00000475993 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 DDX46Q7L014 1031 aaKnown RBP11.86□□□□□ -0.51
ABCF1-205ENST00000475993 CCDC97Q96F63 343 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-205ENST00000475993 HDAC6Q9UBN7 1215 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 ZNF232Q9UNY5 417 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 MYH8P13535 1937 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 PECAM1P16284 738 aaPredicted RBP11.86□□□□□ -0.51
ABCF1-205ENST00000475993 ABCD1P33897 745 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 CKAP4Q07065 602 aaKnown RBP11.86□□□□□ -0.51
ABCF1-205ENST00000475993 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 MICALCLQ6ZW33 695 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 C3orf20Q8ND61 904 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 CENPHQ9H3R5 247 aa11.86□□□□□ -0.51
ABCF1-205ENST00000475993 GOLGA8BA8MQT2 603 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 OPA1O60313 960 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 ICA1Q05084 483 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 CCDC40Q4G0X9 1142 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 CDKAL1Q5VV42 579 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 SPDL1Q96EA4 605 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 CTAGE1Q96RT6 745 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 ABHD10Q9NUJ1 306 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 ENC1O14682 589 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 CPLX1O14810 134 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 KCNQ3O43525 872 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
ABCF1-205ENST00000475993 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
ABCF1-205ENST00000475993 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.85□□□□□ -0.51
ABCF1-205ENST00000475993 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.85□□□□□ -0.51
ABCF1-205ENST00000475993 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
ABCF1-205ENST00000475993 SEMA3EO15041 775 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 PDCLQ13371 301 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 SLC5A9Q2M3M2 681 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 TTMPQ5BVD1 217 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 ZMYM1Q5SVZ6 1142 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 ANAPC4Q9UJX5 808 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 GGA2Q9UJY4 613 aa11.85□□□□□ -0.51
ABCF1-205ENST00000475993 PTPRUQ92729 1446 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms