RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 COL17A1Q9UMD9 1497 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 NPATQ14207 1427 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 GAKO14976 1311 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 SH3TC1Q8TE82 1336 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 A0A0B4J203 849 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ERICH2A1L162 156 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 EME2A4GXA9 379 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 LRRC10BA6NIK2 292 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 LSM1O15116 133 aaKnown RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 MUSKO15146 869 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 SPTLC2O15270 562 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 BIRC5O15392 142 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ATP9BO43861 1147 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ZEB2O60315 1214 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 SNX2O60749 519 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ZNF254O75437 659 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 S100A6P06703 90 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 CCDC166P0CW27 439 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 HSPA8P11142 646 aaKnown RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 SFTPCP11686 197 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ATP5DP30049 168 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 MAGEA10P43363 369 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 GJA9P57773 515 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 SCRN1Q12765 414 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 KIF5AQ12840 1032 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 NMIQ13287 307 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 KIF22Q14807 665 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ACAP1Q15027 740 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 TMEM95Q3KNT9 176 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 MEX3CQ5U5Q3 659 aaKnown RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 NUTM2DQ5VT03 806 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 ARMC3Q5W041 872 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 FCRLBQ6BAA4 426 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ADALQ6DHV7 355 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 PDXDC2PQ6P474 469 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 FIP1L1Q6UN15 594 aaKnown RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 LRRC31Q6UY01 552 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 NLRP9Q7RTR0 991 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 RAB11FIP4Q86YS3 637 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ITPRIPQ8IWB1 547 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 LRRC43Q8N309 656 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 SLC16A10Q8TF71 515 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 NUP133Q8WUM0 1156 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 SPIRE2Q8WWL2 714 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 DPF3Q92784 378 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 ARHGEF2Q92974 986 aaKnown RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 SLC39A13Q96H72 371 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 CABS1Q96KC9 395 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 CTAGE1Q96RT6 745 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 CGREF1Q99674 301 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 MTRQ99707 1265 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 UQCC2Q9BRT2 126 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 BCL2L13Q9BXK5 485 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 RTFDC1Q9BY42 306 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 EIF2AQ9BY44 585 aaKnown RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 FAM117AQ9C073 453 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 OSBPL5Q9H0X9 879 aaPredicted RBP4.32□□□□□ -1.72
LSM2-211ENST00000475835 ATP6V0A4Q9HBG4 840 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 PARVGQ9HBI0 331 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 PDRG1Q9NUG6 133 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 TCP11L1Q9NUJ3 509 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 FKBP14Q9NWM8 211 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 IL1RAPL1Q9NZN1 696 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 DNAJC5BQ9UF47 199 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 LCMT1Q9UIC8 334 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 RCAN3Q9UKA8 241 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 HDAC9Q9UKV0 1011 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 TMCO1Q9UM00 188 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 CEP131Q9UPN4 1083 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 AKAP12Q02952 1782 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 CDC42BPBQ9Y5S2 1711 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 IQGAP3Q86VI3 1631 aa4.32□□□□□ -1.72
LSM2-211ENST00000475835 FAM135AQ9P2D6 1515 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 GPATCH8Q9UKJ3 1502 aaKnown RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 BLMP54132 1417 aaPredicted RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 CARMIL2Q6F5E8 1435 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 PRG4Q92954 1404 aaPredicted RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 ELP1O95163 1332 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 IQANK1A0A1B0GTG1 560 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 CLRN2A0PK11 232 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 HNRNPCL2B2RXH8 293 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 NDUFAB1O14561 156 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 POLR3GO15318 223 aaPredicted RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 FIBPO43427 364 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 GTPBP6O43824 516 aaPredicted RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 TSPAN1O60635 241 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 HNRNPCL1O60812 293 aaKnown RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 TRPA1O75762 1119 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 TMCC1O94876 653 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 MBD4O95243 580 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 RAPGEF3O95398 923 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 VIMP08670 466 aaKnown RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 PDGFRBP09619 1106 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 ALOX15P16050 662 aaPredicted RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 ENDOUP21128 410 aaKnown RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 HSD3B2P26439 372 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 CLNS1AP54105 237 aaKnown RBP4.31□□□□□ -1.72
LSM2-211ENST00000475835 OXCT1P55809 520 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 AP2B1P63010 937 aa4.31□□□□□ -1.72
LSM2-211ENST00000475835 DR1Q01658 176 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms