RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 GDF15Q99988 308 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 OGDHLQ9ULD0 1010 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 CYP2D6P10635 497 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 SHMT1P34896 483 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 PDE3AQ14432 1141 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 LHX8Q68G74 356 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
ACTB-209ENST00000473257 EDC3Q96F86 508 aaKnown RBP13.67□□□□□ -0.22
ACTB-209ENST00000473257 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
ACTB-209ENST00000473257 SMIM22K7EJ46 135 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 VCAM1P19320 739 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 MAPK4P31152 587 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 CERKLQ49MI3 558 aaPredicted RBP13.66□□□□□ -0.22
ACTB-209ENST00000473257 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 CLEC10AQ8IUN9 316 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 MIER1Q8N108 512 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 SOCS4Q8WXH5 440 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
ACTB-209ENST00000473257 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
ACTB-209ENST00000473257 CHGBP05060 677 aa13.65□□□□□ -0.22
ACTB-209ENST00000473257 XRCC5P13010 732 aaKnown RBP13.65□□□□□ -0.22
ACTB-209ENST00000473257 RGS2P41220 211 aa13.65□□□□□ -0.22
ACTB-209ENST00000473257 SEPT2Q15019 361 aa13.65□□□□□ -0.22
ACTB-209ENST00000473257 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
ACTB-209ENST00000473257 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
ACTB-209ENST00000473257 A0A1W2PRG0 241 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 PDE6AP16499 860 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 CYP2C19P33261 490 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 MAP3K12Q12852 859 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 MAP2K5Q13163 448 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 CATSPERGQ6ZRH7 1159 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 TRPV1Q8NER1 839 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 NPLOC4Q8TAT6 608 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 SDR42E1Q8WUS8 393 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
ACTB-209ENST00000473257 APBA2Q99767 749 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
ACTB-209ENST00000473257 UNC80Q8N2C7 3258 aa13.64□□□□□ -0.23
ACTB-209ENST00000473257 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 SPDYE16A6NNV3 312 aaPredicted RBP13.63□□□□□ -0.23
ACTB-209ENST00000473257 GOLIM4O00461 696 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 MPHOSPH10O00566 681 aaKnown RBP13.63□□□□□ -0.23
ACTB-209ENST00000473257 PRKAB2O43741 272 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 POLR3DP05423 398 aaPredicted RBP13.63□□□□□ -0.23
ACTB-209ENST00000473257 COL6A1P12109 1028 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
ACTB-209ENST00000473257 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
ACTB-209ENST00000473257 SLC9C2Q5TAH2 1124 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 ANO1Q5XXA6 986 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
ACTB-209ENST00000473257 LCORLQ8N3X6 602 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 SLC17A8Q8NDX2 589 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 DYNLL2Q96FJ2 89 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 ZNF532Q9HCE3 1301 aa13.63□□□□□ -0.23
ACTB-209ENST00000473257 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 PTPREP23469 700 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 CNGA1P29973 690 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 UBE2OQ9C0C9 1292 aaKnown RBP13.62□□□□□ -0.23
ACTB-209ENST00000473257 EHD4Q9H223 541 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 ARMT1Q9H993 441 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 MCM9Q9NXL9 1143 aa13.62□□□□□ -0.23
ACTB-209ENST00000473257 NAV1Q8NEY1 1877 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 TCRBV5S4A2TA0A5A2 114 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 BMP8BP34820 402 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 GABPAQ06546 454 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 SENP6Q9GZR1 1112 aaPredicted RBP13.61□□□□□ -0.23
ACTB-209ENST00000473257 CABP5Q9NP86 173 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 EYSQ5T1H1 3165 aa13.61□□□□□ -0.23
ACTB-209ENST00000473257 SLC15A5A6NIM6 579 aa13.6□□□□□ -0.23
ACTB-209ENST00000473257 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
ACTB-209ENST00000473257 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
ACTB-209ENST00000473257 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
ACTB-209ENST00000473257 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
ACTB-209ENST00000473257 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
ACTB-209ENST00000473257 SPICE1Q8N0Z3 855 aa13.6□□□□□ -0.23
ACTB-209ENST00000473257 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms