RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ANAPC4Q9UJX5 808 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 SGSM2O43147 1006 aa23.5■■□□□ 1.35
HDAC7-220ENST00000471235 PRDM1O75626 825 aa23.5■■□□□ 1.35
HDAC7-220ENST00000471235 SLC3A2P08195 630 aaKnown RBP23.5■■□□□ 1.35
HDAC7-220ENST00000471235 BACE1P56817 501 aa23.5■■□□□ 1.35
HDAC7-220ENST00000471235 CRHR2Q13324 411 aa23.5■■□□□ 1.35
HDAC7-220ENST00000471235 TAF1CQ15572 869 aaPredicted RBP23.5■■□□□ 1.35
HDAC7-220ENST00000471235 PROCA1Q8NCQ7 364 aaPredicted RBP23.5■■□□□ 1.35
HDAC7-220ENST00000471235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.5■■□□□ 1.35
HDAC7-220ENST00000471235 TACC3Q9Y6A5 838 aa23.5■■□□□ 1.35
HDAC7-220ENST00000471235 PLIN4Q96Q06 1357 aa23.5■■□□□ 1.35
HDAC7-220ENST00000471235 RLFQ13129 1914 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 USP17L10C9JJH3 530 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 PDHXO00330 501 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 PDE4BQ07343 736 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 ACER1Q8TDN7 264 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 FEZ1Q99689 392 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 NBPF3Q9H094 633 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 ZNF287Q9HBT7 754 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 AGTPBP1Q9UPW5 1226 aa23.49■■□□□ 1.35
HDAC7-220ENST00000471235 HAND2P61296 217 aa23.48■■□□□ 1.35
HDAC7-220ENST00000471235 ICA1Q05084 483 aa23.48■■□□□ 1.35
HDAC7-220ENST00000471235 TREML2Q5T2D2 321 aa23.48■■□□□ 1.35
HDAC7-220ENST00000471235 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.48■■□□□ 1.35
HDAC7-220ENST00000471235 C19orf81C9J6K1 198 aa23.47■■□□□ 1.35
HDAC7-220ENST00000471235 ZYXQ15942 572 aaKnown RBP23.47■■□□□ 1.35
HDAC7-220ENST00000471235 PRDM10Q9NQV6 1147 aa23.47■■□□□ 1.35
HDAC7-220ENST00000471235 A0A0G2JMZ2 1700 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 A0A1W2PRG0 241 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 USP17L2Q6R6M4 530 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 TBC1D10CQ8IV04 446 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 ADGRA2Q96PE1 1338 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 ESYT1Q9BSJ8 1104 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 KIAA1683Q9H0B3 1180 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 ZFYVE28Q9HCC9 887 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 INCENPQ9NQS7 918 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 TMOD4Q9NZQ9 345 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 SLC45A1Q9Y2W3 748 aa23.46■■□□□ 1.35
HDAC7-220ENST00000471235 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.34
HDAC7-220ENST00000471235 GPR25O00155 361 aa23.45■■□□□ 1.34
HDAC7-220ENST00000471235 ORC4O43929 436 aa23.45■■□□□ 1.34
HDAC7-220ENST00000471235 PTH1RQ03431 593 aa23.45■■□□□ 1.34
HDAC7-220ENST00000471235 NOM1Q5C9Z4 860 aaKnown RBP23.45■■□□□ 1.34
HDAC7-220ENST00000471235 SIAH1Q8IUQ4 282 aa23.45■■□□□ 1.34
HDAC7-220ENST00000471235 ZNF444Q8N0Y2 327 aaPredicted RBP23.45■■□□□ 1.34
HDAC7-220ENST00000471235 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
HDAC7-220ENST00000471235 EMILIN3Q9NT22 766 aa23.45■■□□□ 1.34
HDAC7-220ENST00000471235 IGKV6D-41A0A0C4DH26 115 aa23.44■■□□□ 1.34
HDAC7-220ENST00000471235 CDC45O75419 566 aa23.44■■□□□ 1.34
HDAC7-220ENST00000471235 FGRP09769 529 aa23.44■■□□□ 1.34
HDAC7-220ENST00000471235 FAM47AQ5JRC9 791 aa23.44■■□□□ 1.34
HDAC7-220ENST00000471235 PARK7Q99497 189 aaKnown RBP23.44■■□□□ 1.34
HDAC7-220ENST00000471235 KANSL2Q9H9L4 492 aa23.44■■□□□ 1.34
HDAC7-220ENST00000471235 ARHGEF10LQ9HCE6 1279 aa23.44■■□□□ 1.34
HDAC7-220ENST00000471235 EEF2P13639 858 aaKnown RBP23.43■■□□□ 1.34
HDAC7-220ENST00000471235 USP14P54578 494 aa23.43■■□□□ 1.34
HDAC7-220ENST00000471235 NEDD1Q8NHV4 660 aa23.43■■□□□ 1.34
HDAC7-220ENST00000471235 STAG1Q8WVM7 1258 aa23.43■■□□□ 1.34
HDAC7-220ENST00000471235 CTNNA3Q9UI47 895 aa23.43■■□□□ 1.34
HDAC7-220ENST00000471235 ZNF213O14771 459 aa23.42■■□□□ 1.34
HDAC7-220ENST00000471235 TSPY3P0CV98 308 aa23.42■■□□□ 1.34
HDAC7-220ENST00000471235 TSPY8P0CW00 308 aa23.42■■□□□ 1.34
HDAC7-220ENST00000471235 CYP2C8P10632 490 aa23.42■■□□□ 1.34
HDAC7-220ENST00000471235 TFAP4Q01664 338 aa23.42■■□□□ 1.34
HDAC7-220ENST00000471235 AKNAD1Q5T1N1 836 aa23.42■■□□□ 1.34
HDAC7-220ENST00000471235 ZNF296Q8WUU4 475 aaPredicted RBP23.42■■□□□ 1.34
HDAC7-220ENST00000471235 NEDD4P46934 1319 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 TLR2O60603 784 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 VCAM1P19320 739 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 ATP2B2Q01814 1243 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 PABPC4Q13310 644 aaKnown RBP eCLIP23.41■■□□□ 1.34
HDAC7-220ENST00000471235 IMMTQ16891 758 aaKnown RBP23.41■■□□□ 1.34
HDAC7-220ENST00000471235 CEP95Q96GE4 821 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 SH2D4AQ9H788 454 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 PNMA3Q9UL41 463 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 TMX2Q9Y320 296 aa23.41■■□□□ 1.34
HDAC7-220ENST00000471235 TSPY2A6NKD2 308 aa23.4■■□□□ 1.34
HDAC7-220ENST00000471235 RANBP6O60518 1105 aaKnown RBP23.4■■□□□ 1.34
HDAC7-220ENST00000471235 PCP11498 1178 aaKnown RBP23.4■■□□□ 1.34
HDAC7-220ENST00000471235 RRP12Q5JTH9 1297 aaKnown RBP23.4■■□□□ 1.34
HDAC7-220ENST00000471235 TOMM22Q9NS69 142 aa23.4■■□□□ 1.34
HDAC7-220ENST00000471235 U3KPZ7 1027 aaPredicted RBP23.4■■□□□ 1.34
HDAC7-220ENST00000471235 FKTNO75072 461 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 HOXA7P31268 230 aaPredicted RBP23.39■■□□□ 1.33
HDAC7-220ENST00000471235 KIAA1755Q5JYT7 1200 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 CASC1Q6TDU7 716 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 MFSD6Q6ZSS7 791 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 LSG1Q9H089 658 aaKnown RBP23.39■■□□□ 1.33
HDAC7-220ENST00000471235 ASCC2Q9H1I8 757 aaPredicted RBP23.39■■□□□ 1.33
HDAC7-220ENST00000471235 RNF41Q9H4P4 317 aaPredicted RBP23.39■■□□□ 1.33
HDAC7-220ENST00000471235 VCPKMTQ9H867 229 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 MTMR4Q9NYA4 1195 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 NYAP2Q9P242 653 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 CPA4Q9UI42 421 aa23.39■■□□□ 1.33
HDAC7-220ENST00000471235 DOCK3Q8IZD9 2030 aa23.38■■□□□ 1.33
HDAC7-220ENST00000471235 OSBPP22059 807 aa23.38■■□□□ 1.33
HDAC7-220ENST00000471235 C17orf99Q6UX52 265 aa23.38■■□□□ 1.33
HDAC7-220ENST00000471235 NKX2-3Q8TAU0 364 aa23.38■■□□□ 1.33
HDAC7-220ENST00000471235 MAP4K1Q92918 833 aa23.38■■□□□ 1.33
HDAC7-220ENST00000471235 IRX3P78415 501 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms