RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 UBE3DQ7Z6J8 389 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 SRPK1Q96SB4 655 aaKnown RBP6.15□□□□□ -1.42
TTC3-213ENST00000469939 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 NT5C1AQ9BXI3 368 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 NOP58Q9Y2X3 529 aaKnown RBP6.15□□□□□ -1.42
TTC3-213ENST00000469939 TACC3Q9Y6A5 838 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 FAM221BA6H8Z2 402 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 IBSPP21815 317 aaPredicted RBP6.14□□□□□ -1.43
TTC3-213ENST00000469939 GARTP22102 1010 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 GRK4P32298 578 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 FBXL19Q6PCT2 694 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 BNC2Q6ZN30 1099 aaPredicted RBP6.14□□□□□ -1.43
TTC3-213ENST00000469939 NOL8Q76FK4 1167 aaKnown RBP6.14□□□□□ -1.43
TTC3-213ENST00000469939 HNRNPLLQ8WVV9 542 aaKnown RBP6.14□□□□□ -1.43
TTC3-213ENST00000469939 GATAD2BQ8WXI9 593 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 POLR3GLQ9BT43 218 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 LRRC4CQ9HCJ2 640 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 KCNQ5Q9NR82 932 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 IFT57Q9NWB7 429 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 SNTG2Q9NY99 539 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 STRIP2Q9ULQ0 834 aa6.14□□□□□ -1.43
TTC3-213ENST00000469939 FAM221AA4D161 298 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 CILPO75339 1184 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 LEFTY1O75610 366 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 BPNT1O95861 308 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 F13A1P00488 732 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 YBX3P16989 372 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■■□□□ 12.6
TTC3-213ENST00000469939 ANAPC15P60006 121 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 FAM160A1Q05DH4 1040 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 COL9A2Q14055 689 aaPredicted RBP6.13□□□□□ -1.43
TTC3-213ENST00000469939 RASA3Q14644 834 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 PLEKHG4Q58EX7 1191 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 ARMCX6Q7L4S7 300 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 DTX1Q86Y01 620 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 HID1Q8IV36 788 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 TOP6BLQ8N6T0 577 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 ZCRB1Q8TBF4 217 aaKnown RBP6.13□□□□□ -1.43
TTC3-213ENST00000469939 DEPDC7Q96QD5 511 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 TRIM55Q9BYV6 548 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 FBRSQ9HAH7 460 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 COL4A3BPQ9Y5P4 624 aa6.13□□□□□ -1.43
TTC3-213ENST00000469939 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 GREM1O60565 184 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 LRIG2O94898 1065 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 SPINK2P20155 84 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 CAP2P40123 477 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 PDE4BQ07343 736 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 SLBPQ14493 270 aaKnown RBP eCLIP6.12□□□□□ -1.43
TTC3-213ENST00000469939 MSMPQ1L6U9 139 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 SNAP47Q5SQN1 464 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 FILIP1Q7Z7B0 1213 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 GOLM1Q8NBJ4 401 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 METTL14Q9HCE5 456 aaKnown RBP6.12□□□□□ -1.43
TTC3-213ENST00000469939 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 PRDM10Q9NQV6 1147 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 PRKAG3Q9UGI9 489 aa6.12□□□□□ -1.43
TTC3-213ENST00000469939 U2SURPO15042 1029 aaKnown RBP6.11□□□□□ -1.43
TTC3-213ENST00000469939 PGRP06401 933 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 TAL1P17542 331 aaPredicted RBP6.11□□□□□ -1.43
TTC3-213ENST00000469939 NKG7Q16617 165 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 FOXQ1Q9C009 403 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 KANSL2Q9H9L4 492 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 UBP1Q9NZI7 540 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
TTC3-213ENST00000469939 SUPT16HQ9Y5B9 1047 aaKnown RBP6.11□□□□□ -1.43
TTC3-213ENST00000469939 DNAJC6O75061 913 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 GP2P55259 537 aaKnown RBP6.1□□□□□ -1.43
TTC3-213ENST00000469939 MPP2Q14168 576 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 FAM196AQ6ZSG2 479 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 MFSD2AQ8NA29 543 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 FMNL2Q96PY5 1086 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
TTC3-213ENST00000469939 SPC25Q9HBM1 224 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 ZC3H7BQ9UGR2 993 aaKnown RBP6.1□□□□□ -1.43
TTC3-213ENST00000469939 ADAM30Q9UKF2 790 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 RNF114Q9Y508 228 aa6.1□□□□□ -1.43
TTC3-213ENST00000469939 OAS3Q9Y6K5 1087 aaKnown RBP6.1□□□□□ -1.43
TTC3-213ENST00000469939 SMAD7O15105 426 aaKnown RBP6.09□□□□□ -1.43
TTC3-213ENST00000469939 EIF5BO60841 1220 aaKnown RBP6.09□□□□□ -1.43
TTC3-213ENST00000469939 CST3P01034 146 aaPredicted RBP6.09□□□□□ -1.43
TTC3-213ENST00000469939 CRKP46108 304 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 PRAMEF13Q5VWM6 474 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 MRPL41Q8IXM3 137 aaKnown RBP6.09□□□□□ -1.43
TTC3-213ENST00000469939 LILRB2Q8N423 598 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 FAM181AQ8N9Y4 354 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 SH3TC2Q8TF17 1288 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 SHDQ96IW2 340 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 TMEM87BQ96K49 555 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 MKNK2Q9HBH9 465 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 BSDC1Q9NW68 430 aaPredicted RBP6.09□□□□□ -1.43
TTC3-213ENST00000469939 TJP2Q9UDY2 1190 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 GTF2IRD1Q9UHL9 959 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 MSRB2Q9Y3D2 182 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 R3HCC1Q9Y3T6 440 aaKnown RBP6.09□□□□□ -1.43
TTC3-213ENST00000469939 CORINQ9Y5Q5 1042 aa6.09□□□□□ -1.43
TTC3-213ENST00000469939 ROBO2Q9HCK4 1378 aa6.08□□□□□ -1.44
TTC3-213ENST00000469939 PRR36Q9H6K5 1346 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms