RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 ZNF213O14771 459 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 FOXN1O15353 648 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 FOXP2O15409 715 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 CDC45O75419 566 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 TRPA1O75762 1119 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 FGRP09769 529 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.78
SSBP1-208ENST00000469123 ICA1Q05084 483 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 RRP1BQ14684 758 aaKnown RBP10.15□□□□□ -0.78
SSBP1-208ENST00000469123 ARHGEF6Q15052 776 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 TAF1CQ15572 869 aaPredicted RBP10.15□□□□□ -0.78
SSBP1-208ENST00000469123 CCDC178Q5BJE1 867 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 VPS53Q5VIR6 699 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 SLC44A5Q8NCS7 719 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 STAG1Q8WVM7 1258 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 LPAR1Q92633 364 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 C12orf42Q96LP6 360 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
SSBP1-208ENST00000469123 U3KPZ7 1027 aaPredicted RBP10.15□□□□□ -0.78
SSBP1-208ENST00000469123 PCNTO95613 3336 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 CYP2D7A0A087X1C5 515 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 PDHXO00330 501 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 TSPY3P0CV98 308 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 TSPY8P0CW00 308 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 SLURP2P0DP57 97 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 AKR1B1P15121 316 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 RASA1P20936 1047 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 OSBPP22059 807 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 HOXA7P31268 230 aaPredicted RBP10.14□□□□□ -0.79
SSBP1-208ENST00000469123 HMGCS2P54868 508 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 MTMR2Q13614 643 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 AKNAD1Q5T1N1 836 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 GADL1Q6ZQY3 521 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 NEDD1Q8NHV4 660 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 PTPN18Q99952 460 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 CNNM2Q9H8M5 875 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 NYAP2Q9P242 653 aa10.14□□□□□ -0.79
SSBP1-208ENST00000469123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
SSBP1-208ENST00000469123 MYH4Q9Y623 1939 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 TSPY2A6NKD2 308 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SSBP1-208ENST00000469123 TLR2O60603 784 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 GUCY1A2P33402 732 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 GCLCP48506 637 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-208ENST00000469123 MOGSQ13724 837 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 SEPT2Q15019 361 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 MFSD6Q6ZSS7 791 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 FAM43AQ8N2R8 423 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 ESR2Q92731 530 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 KRT23Q9C075 422 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 GOPCQ9HD26 462 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 TMX2Q9Y320 296 aa10.13□□□□□ -0.79
SSBP1-208ENST00000469123 CASP8AP2Q9UKL3 1982 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 GPR25O00155 361 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 TTLL1O95922 423 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 IRX3P78415 501 aaPredicted RBP10.12□□□□□ -0.79
SSBP1-208ENST00000469123 TRDNQ13061 729 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 CRHR2Q13324 411 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 GPAT2Q6NUI2 795 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
SSBP1-208ENST00000469123 ERO1AQ96HE7 468 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 TCP11L1Q9NUJ3 509 aa10.12□□□□□ -0.79
SSBP1-208ENST00000469123 MYPNQ86TC9 1320 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L15C9J2P7 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L13C9JLJ4 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L11C9JVI0 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L18D6R9N7 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L22D6RA61 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L17D6RBQ6 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L19D6RCP7 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L20D6RJB6 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 WDR46O15213 610 aaKnown RBP10.11□□□□□ -0.79
SSBP1-208ENST00000469123 RANBP6O60518 1105 aaKnown RBP10.11□□□□□ -0.79
SSBP1-208ENST00000469123 FKTNO75072 461 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 REC8O95072 547 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 TBC1D8O95759 1140 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 GNRH1P01148 92 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 LBX1P52954 281 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 JAG1P78504 1218 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 TFAP4Q01664 338 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 EVX2Q03828 476 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 USP17L24Q0WX57 530 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 KIF22Q14807 665 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
SSBP1-208ENST00000469123 RNF20Q5VTR2 975 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 IQCA1Q86XH1 822 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 GMCL1P1Q8NEA9 526 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 MAP4K1Q92918 833 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 MKL1Q969V6 931 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 TTC14Q96N46 770 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 TOMM22Q9NS69 142 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 MTMR4Q9NYA4 1195 aa10.11□□□□□ -0.79
SSBP1-208ENST00000469123 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.11□□□□□ -0.79
SSBP1-208ENST00000469123 PRDM1O75626 825 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 EEF2P13639 858 aaKnown RBP10.1□□□□□ -0.79
SSBP1-208ENST00000469123 VCAM1P19320 739 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms