RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NEFHP12036 1026 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 CKAP4Q07065 602 aaKnown RBP15.49■□□□□ 0.07
BRAT1-203ENST00000467558 SYNE4Q8N205 404 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 CSGALNACT2Q8N6G5 542 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 CHURC1Q8WUH1 139 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 CCDC17Q96LX7 622 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
BRAT1-203ENST00000467558 COL15A1P39059 1388 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
BRAT1-203ENST00000467558 A0A1W2PQ27 194 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 A0A1W2PQ64 194 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 A0A1W2PQD8 194 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 PAF1Q8N7H5 531 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 IGSF22Q8N9C0 903 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 TCHPQ9BT92 498 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 GOPCQ9HD26 462 aa15.49■□□□□ 0.07
BRAT1-203ENST00000467558 RXRBP28702 533 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 CABP7Q86V35 215 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 TMOD4Q9NZQ9 345 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 SERTAD1Q9UHV2 236 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 MAPK8IP1Q9UQF2 711 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 BACH1O14867 736 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 TRIM14Q14142 442 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 CERKLQ49MI3 558 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-203ENST00000467558 CHAMP1Q96JM3 812 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 ZSWIM5Q9P217 1185 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 IMPACTQ9P2X3 320 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 ZBTB21Q9ULJ3 1066 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 IBSPP21815 317 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-203ENST00000467558 SEPT7Q16181 437 aaKnown RBP15.48■□□□□ 0.07
BRAT1-203ENST00000467558 PAXIP1Q6ZW49 1069 aaPredicted RBP15.48■□□□□ 0.07
BRAT1-203ENST00000467558 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
BRAT1-203ENST00000467558 VPS16Q9H269 839 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 H0YHG0 523 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 IFNAR1P17181 557 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 FOXO4P98177 505 aa15.48■□□□□ 0.07
BRAT1-203ENST00000467558 CEP170BQ9Y4F5 1589 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 PPLO60437 1756 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 CTAGE15A4D2H0 777 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 SH2B2O14492 632 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 SLU7O95391 586 aaKnown RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 CTAGE8P0CG41 777 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 NT5C2P49902 561 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 CTAGE6Q86UF2 777 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 CTAGE4Q8IX94 777 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 FOXP1Q9H334 677 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 CTAGE9A4FU28 777 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 ADRA2BP18089 450 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 SLC39A14Q15043 492 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 USH1GQ495M9 461 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 PHACTR2O75167 634 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 FMNL1O95466 1100 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-203ENST00000467558 CFBP00751 764 aa15.47■□□□□ 0.07
BRAT1-203ENST00000467558 LARGE1O95461 756 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-203ENST00000467558 ARID5AQ03989 594 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 POLR3EQ9NVU0 708 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 BIN2Q9UBW5 565 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-203ENST00000467558 PUF60Q9UHX1 559 aaKnown RBP15.46■□□□□ 0.07
BRAT1-203ENST00000467558 DNM3Q9UQ16 869 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 HERC4Q5GLZ8 1057 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-203ENST00000467558 CPXCR1Q8N123 301 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 STAMQ92783 540 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 IMPG2Q9BZV3 1241 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 CETN3O15182 167 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 CHMP2AO43633 222 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 GOLGA8HP0CJ92 632 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 HLTFQ14527 1009 aaKnown RBP eCLIP15.46■□□□□ 0.07
BRAT1-203ENST00000467558 TAF3Q5VWG9 929 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 LRRC47Q8N1G4 583 aaKnown RBP15.46■□□□□ 0.07
BRAT1-203ENST00000467558 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.07
BRAT1-203ENST00000467558 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 ZBED4O75132 1171 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 ICA1Q05084 483 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 PNOCQ13519 176 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 NCAPH2Q6IBW4 605 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 LZTFL1Q9NQ48 299 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 PKD2L1Q9P0L9 805 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 SWAP70Q9UH65 585 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 MINPP1Q9UNW1 487 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 CLIC4Q9Y696 253 aa15.46■□□□□ 0.06
BRAT1-203ENST00000467558 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
BRAT1-203ENST00000467558 MECOMQ03112 1051 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 INF2Q27J81 1249 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 NEK8Q86SG6 692 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 PSTPIP2Q9H939 334 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 H7C1D1 291 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 TSPYL1Q9H0U9 437 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 RCOR1Q9UKL0 485 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 PXDNLA1KZ92 1463 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 DKC1O60832 514 aaKnown RBP eCLIP15.45■□□□□ 0.06
BRAT1-203ENST00000467558 TRAPPC10P48553 1259 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms