RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 ZSCAN16Q9H4T2 348 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-209ENST00000466832 RAPGEFL1Q9UHV5 662 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 CTNNA3Q9UI47 895 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 HACL1Q9UJ83 578 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 KIAA1024Q9UPX6 916 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 MAP3K15Q6ZN16 1313 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 RIC1Q4ADV7 1423 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 MAP4K4O95819 1239 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-209ENST00000466832 TCF3P15923 654 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 GJB2P29033 226 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 KCNJ4P48050 445 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 LMBR1LQ6UX01 489 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 DZIP3Q86Y13 1208 aaKnown RBP6.78□□□□□ -1.32
TRA2B-209ENST00000466832 ZNF687Q8N1G0 1237 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 FAM227BQ96M60 508 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 CCDC85AQ96PX6 553 aaPredicted RBP6.78□□□□□ -1.32
TRA2B-209ENST00000466832 TLR7Q9NYK1 1049 aaKnown RBP6.78□□□□□ -1.32
TRA2B-209ENST00000466832 TMEM63CQ9P1W3 806 aa6.78□□□□□ -1.32
TRA2B-209ENST00000466832 H3BRB1 525 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 RNF113AO15541 343 aaKnown RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ICMTO60725 284 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 DDNO94850 711 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 TPM3P06753 285 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 KRT85P78386 507 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 MAP3K12Q12852 859 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 NAA16Q6N069 864 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ZSCAN25Q6NSZ9 544 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 SMARCC2Q8TAQ2 1214 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 GTF3C6Q969F1 213 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 NEK1Q96PY6 1258 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 PANK2Q9BZ23 570 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 BOLA2Q9H3K6 86 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 TUT1Q9H6E5 874 aaKnown RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 PAG1Q9NWQ8 432 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 CCDC39Q9UFE4 941 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 MAST2Q6P0Q8 1798 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 PFKFB2O60825 505 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ABL1P00519 1130 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 EPHX2P34913 555 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ST3GAL1Q11201 340 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 TOB2Q14106 344 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 TTF1Q15361 905 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ME3Q16798 604 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ADCK5Q3MIX3 580 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 MAP1SQ66K74 1059 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 SAPCD2Q86UD0 394 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 USP48Q86UV5 1035 aa6.77□□□□□ -1.33
TRA2B-209ENST00000466832 ZNF274Q96GC6 653 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 TSR3Q9UJK0 312 aaKnown RBP6.77□□□□□ -1.33
TRA2B-209ENST00000466832 SPTBN5Q9NRC6 3674 aaKnown RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 SOWAHBA6NEL2 793 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 ZNF500O60304 480 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 IL6STP40189 918 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 OXLD1Q5BKU9 147 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 CCDC102BQ68D86 513 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 SMIM5Q71RC9 77 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 DHX32Q7L7V1 743 aaKnown RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 SPSB2Q99619 263 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 DBNDD2Q9BQY9 259 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 HDAC9Q9UKV0 1011 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 TPCN1Q9ULQ1 816 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 NOL7Q9UMY1 257 aaKnown RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 EXOSC10Q01780 885 aaKnown RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 ZNF211Q13398 564 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 CCDC57Q2TAC2 916 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 CCDC158Q5M9N0 1113 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 RBM43Q6ZSC3 357 aaKnown RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 TTLL7Q6ZT98 887 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 CCDC83Q8IWF9 413 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 COL26A1Q96A83 441 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 SIL1Q9H173 461 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 RBSNQ9H1K0 784 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
TRA2B-209ENST00000466832 RRAGDQ9NQL2 400 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 DDX19AQ9NUU7 478 aaKnown RBP6.76□□□□□ -1.33
TRA2B-209ENST00000466832 DUOX1Q9NRD9 1551 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 LTBP3Q9NS15 1303 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 DLEC1Q9Y238 1755 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 NID2Q14112 1375 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 ECM29Q5VYK3 1845 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 NFKBIEO00221 500 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 UQCRFS1P1P0C7P4 283 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 FOXK2Q01167 660 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 ZNF589Q86UQ0 364 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-209ENST00000466832 TPCN2Q8NHX9 752 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 FUCA2Q9BTY2 467 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.75□□□□□ -1.335e-7■□□□□ 10.3
TRA2B-209ENST00000466832 USP25Q9UHP3 1055 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-209ENST00000466832 MKI67P46013 3256 aaKnown RBP6.75□□□□□ -1.33
TRA2B-209ENST00000466832 SALL1Q9NSC2 1324 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 PAPPA2Q9BXP8 1791 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 TMEM265A0A087WTH1 108 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 TNFRSF10AO00220 468 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 C21orf2O43822 256 aa6.75□□□□□ -1.33
TRA2B-209ENST00000466832 LARGE1O95461 756 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms