RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 WDR78Q5VTH9 848 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 MFSD14CQ5VZR4 134 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 EDC3Q96F86 508 aaKnown RBP17.86■□□□□ 0.45
MCF2L-220ENST00000464800 ZNF512BQ96KM6 892 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-220ENST00000464800 PIH1D3Q9NQM4 214 aaKnown RBP17.86■□□□□ 0.45
MCF2L-220ENST00000464800 TNNQ9UQP3 1299 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 LTBP2Q14767 1821 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 NAV1Q8NEY1 1877 aa17.86■□□□□ 0.45
MCF2L-220ENST00000464800 CNMDO75829 334 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 CYP7A1P22680 504 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 USP5P45974 858 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 USP14P54578 494 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 POLA2Q14181 598 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 CERS3Q8IU89 383 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 ZNF236Q9UL36 1845 aa17.85■□□□□ 0.45
MCF2L-220ENST00000464800 SLC15A5A6NIM6 579 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 RAB3GAP1Q15042 981 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 TATDN1Q6P1N9 297 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 LBHD1Q9BQE6 289 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-220ENST00000464800 KIAA1683Q9H0B3 1180 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 EHD4Q9H223 541 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 FLRT1Q9NZU1 646 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 SERPINB13Q9UIV8 391 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 NDUFB9Q9Y6M9 179 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 IVNS1ABPQ9Y6Y0 642 aa17.84■□□□□ 0.45
MCF2L-220ENST00000464800 MSCO60682 206 aa17.83■□□□□ 0.44
MCF2L-220ENST00000464800 IDH1O75874 414 aaKnown RBP17.83■□□□□ 0.44
MCF2L-220ENST00000464800 VCAM1P19320 739 aa17.83■□□□□ 0.44
MCF2L-220ENST00000464800 PTPREP23469 700 aa17.83■□□□□ 0.44
MCF2L-220ENST00000464800 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.44
MCF2L-220ENST00000464800 MIGA1Q8NAN2 632 aa17.83■□□□□ 0.44
MCF2L-220ENST00000464800 SSH3Q8TE77 659 aa17.83■□□□□ 0.44
MCF2L-220ENST00000464800 SENP6Q9GZR1 1112 aaPredicted RBP17.83■□□□□ 0.44
MCF2L-220ENST00000464800 DDX20Q9UHI6 824 aaKnown RBP17.83■□□□□ 0.44
MCF2L-220ENST00000464800 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.44
MCF2L-220ENST00000464800 RLFQ13129 1914 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 A0A0G2JMZ2 1700 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
MCF2L-220ENST00000464800 BCAR3O75815 825 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 CNGA1P29973 690 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 ATP2B2Q01814 1243 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 GRB14Q14449 540 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 ABCB5Q2M3G0 1257 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 CERKLQ49MI3 558 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-220ENST00000464800 LBX2Q6XYB7 198 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 LPAR1Q92633 364 aa17.82■□□□□ 0.44
MCF2L-220ENST00000464800 MYH8P13535 1937 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 DNM1LO00429 736 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 HOXC6P09630 235 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 FAM109BQ6ICB4 259 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-220ENST00000464800 TTC6Q86TZ1 520 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
MCF2L-220ENST00000464800 BTBD7Q9P203 1132 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 PRKAG2Q9UGJ0 569 aa17.81■□□□□ 0.44
MCF2L-220ENST00000464800 A0A0C4DFX4 3053 aa17.8■□□□□ 0.44
MCF2L-220ENST00000464800 SPDYE16A6NNV3 312 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-220ENST00000464800 ATN1P54259 1190 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-220ENST00000464800 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
MCF2L-220ENST00000464800 ACER1Q8TDN7 264 aa17.8■□□□□ 0.44
MCF2L-220ENST00000464800 RPAP3Q9H6T3 665 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-220ENST00000464800 CYP2C19P33261 490 aa17.79■□□□□ 0.44
MCF2L-220ENST00000464800 ZKSCAN2Q63HK3 967 aa17.79■□□□□ 0.44
MCF2L-220ENST00000464800 TMED8Q6PL24 325 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-220ENST00000464800 NPLOC4Q8TAT6 608 aa17.79■□□□□ 0.44
MCF2L-220ENST00000464800 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
MCF2L-220ENST00000464800 CCDC8Q9H0W5 538 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-220ENST00000464800 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
MCF2L-220ENST00000464800 POTEB2H3BUK9 544 aa17.78■□□□□ 0.44
MCF2L-220ENST00000464800 CYBAP13498 195 aa17.78■□□□□ 0.44
MCF2L-220ENST00000464800 SHMT1P34896 483 aa17.78■□□□□ 0.44
MCF2L-220ENST00000464800 RTP1P59025 263 aa17.78■□□□□ 0.44
MCF2L-220ENST00000464800 MAP3K12Q12852 859 aa17.78■□□□□ 0.44
MCF2L-220ENST00000464800 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.78■□□□□ 0.44
MCF2L-220ENST00000464800 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
MCF2L-220ENST00000464800 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
MCF2L-220ENST00000464800 ZNF697Q5TEC3 545 aa17.77■□□□□ 0.44
MCF2L-220ENST00000464800 DPP9Q86TI2 863 aa17.77■□□□□ 0.44
MCF2L-220ENST00000464800 TRPV1Q8NER1 839 aa17.77■□□□□ 0.44
MCF2L-220ENST00000464800 EAF2Q96CJ1 260 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-220ENST00000464800 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
MCF2L-220ENST00000464800 ATP11BQ9Y2G3 1177 aa17.77■□□□□ 0.44
MCF2L-220ENST00000464800 KBTBD13C9JR72 458 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 ADORA2AP29274 412 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 PLCD1P51178 756 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 GJC2Q5T442 439 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-220ENST00000464800 OLFML2BQ68BL8 750 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 ARRDC4Q8NCT1 418 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 COL25A1Q9BXS0 654 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-220ENST00000464800 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 ANTXR1Q9H6X2 564 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 PARP14Q460N5 1801 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 DNAH12Q6ZR08 3092 aa17.76■□□□□ 0.43
MCF2L-220ENST00000464800 STRNO43815 780 aa17.75■□□□□ 0.43
MCF2L-220ENST00000464800 IGHA2P01877 340 aa17.75■□□□□ 0.43
MCF2L-220ENST00000464800 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-220ENST00000464800 GUCY1A2P33402 732 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms