RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 PAGR1Q9BTK6 254 aa23.2■■□□□ 1.3
CCHCR1-210ENST00000464012 MORF4L1Q9UBU8 362 aa23.2■■□□□ 1.3
CCHCR1-210ENST00000464012 SMIM22K7EJ46 135 aa23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 USP14P54578 494 aa23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 OTUD7AQ8TE49 926 aaPredicted RBP23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 C12orf42Q96LP6 360 aa23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 KIAA1683Q9H0B3 1180 aa23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 TXNRD2Q9NNW7 524 aa23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 SWAP70Q9UH65 585 aa23.19■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L12C9JPN9 530 aa23.18■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L21D6R901 530 aa23.18■■□□□ 1.3
CCHCR1-210ENST00000464012 PRPF38BQ5VTL8 546 aaKnown RBP23.18■■□□□ 1.3
CCHCR1-210ENST00000464012 RNF208Q9H0X6 261 aa23.18■■□□□ 1.3
CCHCR1-210ENST00000464012 BRCA2P51587 3418 aa23.18■■□□□ 1.3
CCHCR1-210ENST00000464012 TTC41PQ6P2S7 1318 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 INHAP05111 366 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 VCAM1P19320 739 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 IRF5Q13568 498 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 C12orf60Q5U649 245 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 GPRC5AQ8NFJ5 357 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 UNC93B1Q9H1C4 597 aa23.17■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L15C9J2P7 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L13C9JLJ4 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L11C9JVI0 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L18D6R9N7 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L22D6RA61 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L17D6RBQ6 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L19D6RCP7 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L20D6RJB6 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 AKR1B1P15121 316 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 ERVK-9P63128 1117 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 ERVK-24P63145 666 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 USP17L24Q0WX57 530 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 TMEM179Q6ZVK1 233 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 CLEC10AQ8IUN9 316 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 PXYLP1Q8TE99 480 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 APPBP2Q92624 585 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 SHISA4Q96DD7 197 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 RBPJLQ9UBG7 517 aa23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 ZBTB47Q9UFB7 747 aaPredicted RBP23.16■■□□□ 1.3
CCHCR1-210ENST00000464012 ERC2O15083 957 aa23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 RNF113AO15541 343 aaKnown RBP23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 CDK8P49336 464 aa23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 CTR9Q6PD62 1173 aa23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 PI4K2BQ8TCG2 481 aa23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 GTF3C2Q8WUA4 911 aaPredicted RBP23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 OSBP2Q969R2 916 aa23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 RPAP3Q9H6T3 665 aaPredicted RBP23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 PARP14Q460N5 1801 aa23.15■■□□□ 1.3
CCHCR1-210ENST00000464012 A0A1W2PRG0 241 aa23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 Q3C1V9 767 aa23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 CATSPERGQ6ZRH7 1159 aa23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 CCAR1Q8IX12 1150 aaKnown RBP23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 STK11IPQ8N1F8 1099 aa23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 STRBPQ96SI9 672 aaKnown RBP23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 ARPP21Q9UBL0 812 aaPredicted RBP23.14■■□□□ 1.29
CCHCR1-210ENST00000464012 M0R2C6 588 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 GLRX3O76003 335 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 GJB1P08034 283 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 ZFYP08048 801 aaPredicted RBP23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 MX1P20591 662 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 ICA1Q05084 483 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 ANKRD45Q5TZF3 282 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 POTEEQ6S8J3 1075 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 C16orf86Q6ZW13 317 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 NKX2-3Q8TAU0 364 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 FSD1Q9BTV5 496 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 PORCNQ9H237 461 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 CWC22Q9HCG8 908 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 RLFQ13129 1914 aa23.13■■□□□ 1.29
CCHCR1-210ENST00000464012 GREB1LQ9C091 1923 aaPredicted RBP23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 A0A0G2JMZ2 1700 aa23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 GPAA1O43292 621 aa23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 GJA8P48165 433 aa23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 TANGO6Q9C0B7 1094 aa23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 ARHGEF10LQ9HCE6 1279 aa23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 GJD2Q9UKL4 321 aa23.12■■□□□ 1.29
CCHCR1-210ENST00000464012 MKI67P46013 3256 aaKnown RBP23.11■■□□□ 1.29
CCHCR1-210ENST00000464012 GSG1L2A8MUP6 293 aa23.11■■□□□ 1.29
CCHCR1-210ENST00000464012 CYP2B6P20813 491 aa23.11■■□□□ 1.29
CCHCR1-210ENST00000464012 MAPK4P31152 587 aa23.11■■□□□ 1.29
CCHCR1-210ENST00000464012 MYH4Q9Y623 1939 aa23.11■■□□□ 1.29
CCHCR1-210ENST00000464012 COL11A1P12107 1806 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 MINDY4BA8MYZ0 360 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 CNMDO75829 334 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 ATP2B2Q01814 1243 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 LRRFIP1Q32MZ4 808 aaKnown RBP23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 WDR78Q5VTH9 848 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 GPR142Q7Z601 462 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 U2AF1L4Q8WU68 220 aaKnown RBP23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 CCDC17Q96LX7 622 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 NUDT12Q9BQG2 462 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 RABGAP1Q9Y3P9 1069 aa23.1■■□□□ 1.29
CCHCR1-210ENST00000464012 SPDYE16A6NNV3 312 aaPredicted RBP23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 HMGCRP04035 888 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 TDO2P48775 406 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 TRIM32Q13049 653 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 KIAA1755Q5JYT7 1200 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 SPICE1Q8N0Z3 855 aa23.09■■□□□ 1.29
CCHCR1-210ENST00000464012 SOCS4Q8WXH5 440 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms