RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 USP17L2Q6R6M4 530 aa31.16■■■□□ 2.58
SURF1-203ENST00000463965 PNMA3Q9UL41 463 aa31.16■■■□□ 2.58
SURF1-203ENST00000463965 USP14P54578 494 aa31.15■■■□□ 2.58
SURF1-203ENST00000463965 ZNF444Q8N0Y2 327 aaPredicted RBP31.15■■■□□ 2.58
SURF1-203ENST00000463965 RUFY2Q8WXA3 655 aa31.15■■■□□ 2.58
SURF1-203ENST00000463965 GUCY1A2P33402 732 aa31.14■■■□□ 2.58
SURF1-203ENST00000463965 FOXP2O15409 715 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 OSBPP22059 807 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 SP3Q02447 781 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 TNS4Q8IZW8 715 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 ERO1AQ96HE7 468 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 KIAA1683Q9H0B3 1180 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 ARHGEF10LQ9HCE6 1279 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 PPP4R2Q9NY27 417 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 PTPRFP10586 1907 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 MYH8P13535 1937 aa31.13■■■□□ 2.57
SURF1-203ENST00000463965 FGAP02671 866 aa31.12■■■□□ 2.57
SURF1-203ENST00000463965 TREML2Q5T2D2 321 aa31.12■■■□□ 2.57
SURF1-203ENST00000463965 SH2D4AQ9H788 454 aa31.12■■■□□ 2.57
SURF1-203ENST00000463965 ZMYM6O95789 1325 aa31.11■■■□□ 2.57
SURF1-203ENST00000463965 RASA1P20936 1047 aa31.11■■■□□ 2.57
SURF1-203ENST00000463965 ICA1Q05084 483 aa31.11■■■□□ 2.57
SURF1-203ENST00000463965 ACER1Q8TDN7 264 aa31.11■■■□□ 2.57
SURF1-203ENST00000463965 SMCR8Q8TEV9 937 aaPredicted RBP31.11■■■□□ 2.57
SURF1-203ENST00000463965 KANSL2Q9H9L4 492 aa31.11■■■□□ 2.57
SURF1-203ENST00000463965 CYP2C8P10632 490 aa31.1■■■□□ 2.57
SURF1-203ENST00000463965 ARHGEF6Q15052 776 aa31.1■■■□□ 2.57
SURF1-203ENST00000463965 ZYXQ15942 572 aaKnown RBP31.1■■■□□ 2.57
SURF1-203ENST00000463965 CTU1Q7Z7A3 348 aaKnown RBP31.1■■■□□ 2.57
SURF1-203ENST00000463965 RAD50Q92878 1312 aa31.09■■■□□ 2.57
SURF1-203ENST00000463965 CHMLP26374 656 aa31.09■■■□□ 2.57
SURF1-203ENST00000463965 DGKZQ13574 1117 aa31.09■■■□□ 2.57
SURF1-203ENST00000463965 C12orf42Q96LP6 360 aa31.09■■■□□ 2.57
SURF1-203ENST00000463965 EMILIN3Q9NT22 766 aa31.09■■■□□ 2.57
SURF1-203ENST00000463965 ANAPC4Q9UJX5 808 aa31.09■■■□□ 2.57
SURF1-203ENST00000463965 PRDM1O75626 825 aa31.08■■■□□ 2.57
SURF1-203ENST00000463965 IRX3P78415 501 aaPredicted RBP31.08■■■□□ 2.57
SURF1-203ENST00000463965 KIF22Q14807 665 aa31.08■■■□□ 2.57
SURF1-203ENST00000463965 C17orf99Q6UX52 265 aa31.08■■■□□ 2.57
SURF1-203ENST00000463965 CPA4Q9UI42 421 aa31.08■■■□□ 2.57
SURF1-203ENST00000463965 HOXA7P31268 230 aaPredicted RBP31.07■■■□□ 2.56
SURF1-203ENST00000463965 ATP2B2Q01814 1243 aa31.07■■■□□ 2.56
SURF1-203ENST00000463965 CTDSPL2Q05D32 466 aa31.07■■■□□ 2.56
SURF1-203ENST00000463965 DSCC1Q9BVC3 393 aa31.07■■■□□ 2.56
SURF1-203ENST00000463965 TSPY3P0CV98 308 aa31.06■■■□□ 2.56
SURF1-203ENST00000463965 TSPY8P0CW00 308 aa31.06■■■□□ 2.56
SURF1-203ENST00000463965 ASCC2Q9H1I8 757 aaPredicted RBP31.06■■■□□ 2.56
SURF1-203ENST00000463965 LOC285556D6RIA3 1793 aa31.06■■■□□ 2.56
SURF1-203ENST00000463965 BMP2KLQ5H9B9 411 aa31.05■■■□□ 2.56
SURF1-203ENST00000463965 CD99L2Q8TCZ2 262 aa31.05■■■□□ 2.56
SURF1-203ENST00000463965 CTNNA3Q9UI47 895 aa31.05■■■□□ 2.56
SURF1-203ENST00000463965 ADGRA2Q96PE1 1338 aa31.04■■■□□ 2.56
SURF1-203ENST00000463965 A0A1W2PRG0 241 aa31.04■■■□□ 2.56
SURF1-203ENST00000463965 EEF2P13639 858 aaKnown RBP31.04■■■□□ 2.56
SURF1-203ENST00000463965 GCLCP48506 637 aaPredicted RBP31.04■■■□□ 2.56
SURF1-203ENST00000463965 PKN2Q16513 984 aaKnown RBP31.04■■■□□ 2.56
SURF1-203ENST00000463965 SKAP1Q86WV1 359 aa31.04■■■□□ 2.56
SURF1-203ENST00000463965 TMX2Q9Y320 296 aa31.04■■■□□ 2.56
SURF1-203ENST00000463965 USP17L15C9J2P7 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L13C9JLJ4 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L11C9JVI0 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L18D6R9N7 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L22D6RA61 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L17D6RBQ6 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L19D6RCP7 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L20D6RJB6 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 ZNF213O14771 459 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 USP17L24Q0WX57 530 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 CLEC10AQ8IUN9 316 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 TOMM22Q9NS69 142 aa31.03■■■□□ 2.56
SURF1-203ENST00000463965 PCP11498 1178 aaKnown RBP31.02■■■□□ 2.56
SURF1-203ENST00000463965 VCAM1P19320 739 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 TFAP4Q01664 338 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 PPP4R3BQ5MIZ7 849 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 SIAH1Q8IUQ4 282 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 LPAR1Q92633 364 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.02■■■□□ 2.56
SURF1-203ENST00000463965 MCOLN1Q9GZU1 580 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 EFCC1Q9HA90 598 aa31.02■■■□□ 2.56
SURF1-203ENST00000463965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.02■■■□□ 2.56
SURF1-203ENST00000463965 TSPY2A6NKD2 308 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 ORC4O43929 436 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 BCRP11274 1271 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 HAND2P61296 217 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 LACTBP83111 547 aaPredicted RBP31.01■■■□□ 2.55
SURF1-203ENST00000463965 NEDD1Q8NHV4 660 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 GTF3C2Q8WUA4 911 aaPredicted RBP31.01■■■□□ 2.55
SURF1-203ENST00000463965 RNF41Q9H4P4 317 aaPredicted RBP31.01■■■□□ 2.55
SURF1-203ENST00000463965 GOPCQ9HD26 462 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 NYAP2Q9P242 653 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 TRIM17Q9Y577 477 aa31.01■■■□□ 2.55
SURF1-203ENST00000463965 RANBP6O60518 1105 aaKnown RBP31■■■□□ 2.55
SURF1-203ENST00000463965 FAM47AQ5JRC9 791 aa31■■■□□ 2.55
SURF1-203ENST00000463965 MFSD6Q6ZSS7 791 aa31■■■□□ 2.55
SURF1-203ENST00000463965 VCPKMTQ9H867 229 aa31■■■□□ 2.55
SURF1-203ENST00000463965 FGRP09769 529 aa30.99■■■□□ 2.55
SURF1-203ENST00000463965 IMMTQ16891 758 aaKnown RBP30.99■■■□□ 2.55
SURF1-203ENST00000463965 P2RX7Q99572 595 aaKnown RBP30.99■■■□□ 2.55
SURF1-203ENST00000463965 RPAP3Q9H6T3 665 aaPredicted RBP30.99■■■□□ 2.55
SURF1-203ENST00000463965 IGKV6D-41A0A0C4DH26 115 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms