RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TGFBRAP1Q8WUH2 860 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 USP6NLQ92738 828 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 DHX36Q9H2U1 1008 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 AS3MTQ9HBK9 375 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 PIH1D3Q9NQM4 214 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 TLR7Q9NYK1 1049 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 LRP2BPQ9P2M1 347 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 OGDHLQ9ULD0 1010 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 ZBTB21Q9ULJ3 1066 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 SURF6O75683 361 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 CYP2B6P20813 491 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 IRX3P78415 501 aaPredicted RBP9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 TTC39AQ5SRH9 613 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 SLC39A7Q92504 469 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 ZNF512BQ96KM6 892 aaPredicted RBP9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 P2RX7Q99572 595 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 PORCNQ9H237 461 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 HMX1Q9NP08 348 aaPredicted RBP9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 RBPJLQ9UBG7 517 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 DBNLQ9UJU6 430 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 PALD1Q9ULE6 856 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 EXOC6BQ9Y2D4 811 aa9.68□□□□□ -0.86
CDC42BPA-210ENST00000462553 SMCHD1A6NHR9 2005 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 CNMDO75829 334 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 BAG3O95817 575 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 C7P10643 843 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 COL6A1P12109 1028 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 XRCC5P13010 732 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 PLCG2P16885 1265 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 BMP8BP34820 402 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 ZAP70P43403 619 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 ERVK-24P63145 666 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 DYNLL1P63167 89 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 Q3C1V9 767 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 MORN1Q5T089 497 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 RPAP2Q8IXW5 612 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 SOCS4Q8WXH5 440 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 NOL10Q9BSC4 688 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 TMOD4Q9NZQ9 345 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 SAP30BPQ9UHR5 308 aaKnown RBP9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 ZMYND8Q9ULU4 1186 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 MUC3AQ02505 3323 aa9.67□□□□□ -0.86
CDC42BPA-210ENST00000462553 C19orf81C9J6K1 198 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 SYN1P17600 705 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 CACNB2Q08289 660 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 CCL14Q16627 93 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 TATDN1Q6P1N9 297 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 GPR142Q7Z601 462 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 FOXP4Q8IVH2 680 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 GPRC5AQ8NFJ5 357 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 EAF2Q96CJ1 260 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 C12orf42Q96LP6 360 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 C11orf49Q9H6J7 331 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 GINM1Q9NU53 330 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 NDUFB9Q9Y6M9 179 aa9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 GREB1LQ9C091 1923 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-210ENST00000462553 IGSF3O75054 1194 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 GH2P01242 217 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 ZKSCAN1P17029 563 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 CCND3P30281 292 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 MAPK4P31152 587 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 MAGEA10P43363 369 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 CCDC158Q5M9N0 1113 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 CRACR2BQ8N4Y2 399 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 RHPN1Q8TCX5 695 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 CRBNQ96SW2 442 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 APBA2Q99767 749 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 PAGR1Q9BTK6 254 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 EHD4Q9H223 541 aa9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 CHMP4BQ9H444 224 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-210ENST00000462553 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.87
CDC42BPA-210ENST00000462553 IGHA2P01877 340 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 CYP7A1P22680 504 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 LRRC26Q2I0M4 334 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 LRIT3Q3SXY7 679 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 ASTLQ6HA08 431 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 PLEKHH3Q7Z736 793 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 ERC1Q8IUD2 1116 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 ACER1Q8TDN7 264 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 GTF3C2Q8WUA4 911 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 CCDC8Q9H0W5 538 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 ANTXR1Q9H6X2 564 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 IL1RAPL2Q9NP60 686 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 FLRT1Q9NZU1 646 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 PCDHB15Q9Y5E8 787 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 TTC28Q96AY4 2481 aa9.64□□□□□ -0.87
CDC42BPA-210ENST00000462553 HMMRO75330 724 aa9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-210ENST00000462553 HLA-DOAP06340 250 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms