RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 CATSPERGQ6ZRH7 1159 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 TRMT2AQ8IZ69 625 aaKnown RBP14.6□□□□□ -0.07
HCFC1-204ENST00000461098 CDCA7LQ96GN5 454 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 BAG3O95817 575 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 GH2P01242 217 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 CNGA1P29973 690 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 SMAD3P84022 425 aaKnown RBP14.59□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 SNX17Q15036 470 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 NAA16Q6N069 864 aaPredicted RBP14.59□□□□□ -0.07
HCFC1-204ENST00000461098 TATDN1Q6P1N9 297 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 SH3RF1Q7Z6J0 888 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
HCFC1-204ENST00000461098 BADQ92934 168 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
HCFC1-204ENST00000461098 SAP30BPQ9UHR5 308 aaKnown RBP14.59□□□□□ -0.07
HCFC1-204ENST00000461098 ATP11BQ9Y2G3 1177 aa14.59□□□□□ -0.07
HCFC1-204ENST00000461098 GLRX3O76003 335 aaKnown RBP14.58□□□□□ -0.08
HCFC1-204ENST00000461098 CYP2E1P05181 493 aaPredicted RBP14.58□□□□□ -0.08
HCFC1-204ENST00000461098 PLCG2P16885 1265 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 VCAM1P19320 739 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 CCNA1P78396 465 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 ATP2B2Q01814 1243 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 ZYXQ15942 572 aaKnown RBP14.58□□□□□ -0.08
HCFC1-204ENST00000461098 GORABQ5T7V8 394 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 PDLIM7Q9NR12 457 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 SNRKQ9NRH2 765 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 PRKAG2Q9UGJ0 569 aa14.58□□□□□ -0.08
HCFC1-204ENST00000461098 SPDYE16A6NNV3 312 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-204ENST00000461098 UQCRFS1P1P0C7P4 283 aa14.57□□□□□ -0.08
HCFC1-204ENST00000461098 ITGB8P26012 769 aa14.57□□□□□ -0.08
HCFC1-204ENST00000461098 DYNLL1P63167 89 aaKnown RBP14.57□□□□□ -0.08
HCFC1-204ENST00000461098 TRIM60Q495X7 471 aa14.57□□□□□ -0.08
HCFC1-204ENST00000461098 ACER1Q8TDN7 264 aa14.57□□□□□ -0.08
HCFC1-204ENST00000461098 NOL10Q9BSC4 688 aaKnown RBP14.57□□□□□ -0.08
HCFC1-204ENST00000461098 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
HCFC1-204ENST00000461098 KIAA1683Q9H0B3 1180 aa14.57□□□□□ -0.08
HCFC1-204ENST00000461098 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
HCFC1-204ENST00000461098 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 WDR78Q5VTH9 848 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 ANO1Q5XXA6 986 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
HCFC1-204ENST00000461098 XIRP2A4UGR9 3374 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 MYH1P12882 1939 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 CHD9Q3L8U1 2897 aa14.56□□□□□ -0.08
HCFC1-204ENST00000461098 COBLO75128 1261 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 HLA-DOAP06340 250 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 GNAI3P08754 354 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 FOSL2P15408 326 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 GUCY1A2P33402 732 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 EPHB4P54760 987 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 C1orf53Q5VUE5 145 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 ARRDC4Q8NCT1 418 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 TRIM34Q9BYJ4 488 aa14.55□□□□□ -0.08
HCFC1-204ENST00000461098 PIH1D3Q9NQM4 214 aaKnown RBP14.55□□□□□ -0.08
HCFC1-204ENST00000461098 PRDM5Q9NQX1 630 aaPredicted RBP14.55□□□□□ -0.08
HCFC1-204ENST00000461098 REV3LO60673 3130 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 SEPT4O43236 478 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 ADORA2AP29274 412 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 ADCYAP1R1P41586 468 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 USP14P54578 494 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 USP38Q8NB14 1042 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 DBNDD2Q9BQY9 259 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 MOV10L1Q9BXT6 1211 aaKnown RBP14.54□□□□□ -0.08
HCFC1-204ENST00000461098 RPAP3Q9H6T3 665 aaPredicted RBP14.54□□□□□ -0.08
HCFC1-204ENST00000461098 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 A0A0G2JMZ2 1700 aa14.54□□□□□ -0.08
HCFC1-204ENST00000461098 KBTBD13C9JR72 458 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 ZAP70P43403 619 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 GRIN2CQ14957 1233 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 RAB3GAP1Q15042 981 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 LRRC41Q15345 812 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 PRAMEF19Q5SWL8 479 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 SYMPKQ92797 1274 aaKnown RBP14.53□□□□□ -0.08
HCFC1-204ENST00000461098 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 ZNF512BQ96KM6 892 aaPredicted RBP14.53□□□□□ -0.08
HCFC1-204ENST00000461098 FEZ1Q99689 392 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 EHD4Q9H223 541 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 SERPINB13Q9UIV8 391 aa14.53□□□□□ -0.08
HCFC1-204ENST00000461098 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.09
HCFC1-204ENST00000461098 A0A1W2PRG0 241 aa14.52□□□□□ -0.09
HCFC1-204ENST00000461098 STRNO43815 780 aa14.52□□□□□ -0.09
HCFC1-204ENST00000461098 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.09
HCFC1-204ENST00000461098 SHMT1P34896 483 aa14.52□□□□□ -0.09
HCFC1-204ENST00000461098 TLE2Q04725 743 aa14.52□□□□□ -0.09
HCFC1-204ENST00000461098 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.094e-7■□□□□ 10.4
HCFC1-204ENST00000461098 ABCB5Q2M3G0 1257 aa14.52□□□□□ -0.09
HCFC1-204ENST00000461098 CERKLQ49MI3 558 aaPredicted RBP14.52□□□□□ -0.09
HCFC1-204ENST00000461098 TNNI3KQ59H18 835 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms