RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 COL24A1Q17RW2 1714 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 RILPL1Q5EBL4 403 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 KIAA0825Q8IV33 1275 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.1
CLK3-203ENST00000454830 COA1Q9GZY4 146 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 TTC12Q9H892 705 aaPredicted RBP15.7■□□□□ 0.1
CLK3-203ENST00000454830 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
CLK3-203ENST00000454830 TMC4Q7Z404 712 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 ZSCAN29Q8IWY8 852 aaPredicted RBP15.7■□□□□ 0.1
CLK3-203ENST00000454830 KRI1Q8N9T8 703 aaKnown RBP15.7■□□□□ 0.1
CLK3-203ENST00000454830 ENGASEQ8NFI3 743 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 CMA1P23946 247 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 CPVLQ9H3G5 476 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
CLK3-203ENST00000454830 MPHOSPH10O00566 681 aaKnown RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 PRPF3O43395 683 aaKnown RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 CDK8P49336 464 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 CNNM3Q8NE01 707 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 FOXP1Q9H334 677 aaPredicted RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 USP40Q9NVE5 1235 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 FAM13BQ9NYF5 915 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 DAGLAQ9Y4D2 1042 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 BRWD3Q6RI45 1802 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 TRIM75PA6NK02 468 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 CLCN1P35523 988 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 PPP4CP60510 307 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 ZNF174Q15697 407 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 EZH2Q15910 746 aaKnown RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 STAG2Q8N3U4 1231 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 NAT10Q9H0A0 1025 aaKnown RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 RCAN1P53805 252 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 AXDND1Q5T1B0 1012 aaPredicted RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 C15orf52Q6ZUT6 534 aaKnown RBP15.69■□□□□ 0.1
CLK3-203ENST00000454830 HEATR3Q7Z4Q2 680 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 STK32BQ9NY57 414 aa15.69■□□□□ 0.1
CLK3-203ENST00000454830 FLT1P17948 1338 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 GPR75-ASB3A0A0A6YYF3 556 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 GOLGA6L6A8MZA4 724 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 AOPEPQ8N6M6 819 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 CEP131Q9UPN4 1083 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 GOLGB1Q14789 3259 aaKnown RBP15.68■□□□□ 0.1
CLK3-203ENST00000454830 PIK3AP1Q6ZUJ8 805 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 IL17RBQ9NRM6 502 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 UBR3Q6ZT12 1888 aa15.68■□□□□ 0.1
CLK3-203ENST00000454830 SCG2P13521 617 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 TCP10Q12799 353 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 CASZ1Q86V15 1759 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 KCNH3Q9ULD8 1083 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 AP5Z1O43299 807 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 PKN1Q16512 942 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 SHC4Q6S5L8 630 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 KIAA1468Q9P260 1216 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLK3-203ENST00000454830 CUTAO60888 179 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 FGRP09769 529 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 CACNB3P54284 484 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 SF3B2Q13435 895 aaKnown RBP15.67■□□□□ 0.1
CLK3-203ENST00000454830 TMED8Q6PL24 325 aaPredicted RBP15.67■□□□□ 0.1
CLK3-203ENST00000454830 KCNQ5Q9NR82 932 aa15.67■□□□□ 0.1
CLK3-203ENST00000454830 PPP6R2O75170 966 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
CLK3-203ENST00000454830 RASA1P20936 1047 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 TOB1P50616 345 aaPredicted RBP15.66■□□□□ 0.1
CLK3-203ENST00000454830 PTPAQ15257 358 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 RCSD1Q6JBY9 416 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 RASGRP2Q7LDG7 609 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 TMEM47Q9BQJ4 181 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 GRIN1Q05586 938 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 PNOCQ13519 176 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 DGKHQ86XP1 1220 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 NOM1Q5C9Z4 860 aaKnown RBP15.66■□□□□ 0.1
CLK3-203ENST00000454830 RBM43Q6ZSC3 357 aaKnown RBP15.66■□□□□ 0.1
CLK3-203ENST00000454830 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 RASGRP4Q8TDF6 673 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 MAP3K14Q99558 947 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 TRIM34Q9BYJ4 488 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 CNTNAP5Q8WYK1 1306 aa15.66■□□□□ 0.1
CLK3-203ENST00000454830 POLR2DO15514 142 aaKnown RBP15.65■□□□□ 0.1
CLK3-203ENST00000454830 MCM7P33993 719 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 HS1BP3Q53T59 392 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 RASSF8Q8NHQ8 419 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 TEKT1Q969V4 418 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
CLK3-203ENST00000454830 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.65■□□□□ 0.1
CLK3-203ENST00000454830 CCDC88AQ3V6T2 1871 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 DUOX1Q9NRD9 1551 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 DPCR1Q3MIW9 517 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 CERS5Q8N5B7 392 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 MKRN1Q9UHC7 482 aaKnown RBP15.65■□□□□ 0.1
CLK3-203ENST00000454830 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 CCDC178Q5BJE1 867 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 EARS2Q5JPH6 523 aaKnown RBP15.65■□□□□ 0.1
CLK3-203ENST00000454830 USP17L2Q6R6M4 530 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 CLEC10AQ8IUN9 316 aa15.65■□□□□ 0.1
CLK3-203ENST00000454830 GNAQP50148 359 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 RHBDL3P58872 404 aa15.64■□□□□ 0.09
CLK3-203ENST00000454830 TIAM2Q8IVF5 1701 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms