RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TEKT1Q969V4 418 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 GMCL1Q96IK5 515 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 ADARB2Q9NS39 739 aaKnown RBP5.9□□□□□ -1.47
RIF1-207ENST00000454583 LMBRD1Q9NUN5 540 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 GNL3LQ9NVN8 582 aaKnown RBP5.9□□□□□ -1.47
RIF1-207ENST00000454583 AKR1B1P15121 316 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 APOA5Q6Q788 366 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 RILPL2Q969X0 211 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 TMX3Q96JJ7 454 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 DHX36Q9H2U1 1008 aaKnown RBP5.9□□□□□ -1.47
RIF1-207ENST00000454583 NYAP2Q9P242 653 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 SWAP70Q9UH65 585 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 SLC4A4Q9Y6R1 1079 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 USP17L12C9JPN9 530 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 USP17L21D6R901 530 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 ATP2A1O14983 1001 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 RAD17O75943 681 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 B3GNT9Q6UX72 402 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 DAGLBQ8NCG7 672 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 TDRD3Q9H7E2 651 aaKnown RBP5.89□□□□□ -1.47
RIF1-207ENST00000454583 HERC5Q9UII4 1024 aaKnown RBP5.89□□□□□ -1.47
RIF1-207ENST00000454583 CNOT7Q9UIV1 285 aaKnown RBP5.89□□□□□ -1.47
RIF1-207ENST00000454583 WNT7AO00755 349 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 TNIP1Q15025 636 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 SAMD7Q7Z3H4 446 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 HHIPL1Q96JK4 782 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 NEK1Q96PY6 1258 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 FUCA2Q9BTY2 467 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 TMEM39BQ9GZU3 492 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 CHMP5Q9NZZ3 219 aa5.89□□□□□ -1.47
RIF1-207ENST00000454583 C19orf67A6NJJ6 358 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 CAP2P40123 477 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 FAM177A1Q8N128 213 aaPredicted RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 TGFBRAP1Q8WUH2 860 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 ZSCAN10Q96SZ4 725 aaPredicted RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 GLIS2Q9BZE0 524 aaPredicted RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 MAF1Q9H063 256 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 TMX2Q9Y320 296 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 DOCK3Q8IZD9 2030 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 A0A0G2JLL6 359 aaPredicted RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 PDHBP11177 359 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 U2AF2P26368 475 aaKnown RBP eCLIP5.88□□□□□ -1.474e-10■■■■□ 26.1
RIF1-207ENST00000454583 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 PRRT2Q7Z6L0 340 aaPredicted RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 NIM1KQ8IY84 436 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 LLPHQ9BRT6 129 aaKnown RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 RANBP17Q9H2T7 1088 aaKnown RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.88□□□□□ -1.47
RIF1-207ENST00000454583 KIF4BQ2VIQ3 1234 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 GPT2Q8TD30 523 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 RUFY2Q8WXA3 655 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 PHF20Q9BVI0 1012 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 EMILIN3Q9NT22 766 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 PATJQ8NI35 1801 aa5.88□□□□□ -1.47
RIF1-207ENST00000454583 POTEFA5A3E0 1075 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 C6orf229H3BNL8 230 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 EIF5BO60841 1220 aaKnown RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 IDH1O75874 414 aaKnown RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 DDAH1O94760 285 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 RESTQ13127 1097 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 CHRDL2Q6WN34 429 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 Q6ZUG5 572 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 KIAA0825Q8IV33 1275 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 MORC4Q8TE76 937 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 USP40Q9NVE5 1235 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 BCS1LQ9Y276 419 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 KIF28PB7ZC32 967 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 PLCG2P16885 1265 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 CACNB3P54284 484 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 EARS2Q5JPH6 523 aaKnown RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 RBM43Q6ZSC3 357 aaKnown RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 TMTC3Q6ZXV5 915 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 FOXP4Q8IVH2 680 aaPredicted RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 LARGE2Q8N3Y3 721 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 LRRC15Q8TF66 581 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 SPZ1Q9BXG8 430 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 R3HDMLQ9H3Y0 253 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 MYH11P35749 1972 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 SCN10AQ9Y5Y9 1956 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 TRIM6-TRIM34B2RNG4 842 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 FMNL1O95466 1100 aaPredicted RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 HMGB1P09429 215 aaKnown RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 IFNAR1P17181 557 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 TOB1P50616 345 aaPredicted RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 ZNF445P59923 1031 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 NBPF12Q5TAG4 269 aaPredicted RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 GAS2L3Q86XJ1 694 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 MAPKAPK5Q8IW41 473 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 RNF25Q96BH1 459 aaPredicted RBP5.87□□□□□ -1.47
RIF1-207ENST00000454583 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 DIAPH3Q9NSV4 1193 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 MTMR6Q9Y217 621 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 SLC45A1Q9Y2W3 748 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 TNKSO95271 1327 aa5.87□□□□□ -1.47
RIF1-207ENST00000454583 B4E1Z4 1266 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms