RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CNGA1P29973 690 aa21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 GJC2Q5T442 439 aaPredicted RBP21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 GORABQ5T7V8 394 aa21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 CATSPERGQ6ZRH7 1159 aa21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 CRACR2BQ8N4Y2 399 aaPredicted RBP21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 MYLIPQ8WY64 445 aa21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 SNRKQ9NRH2 765 aa21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 MYH1P12882 1939 aa21.14■□□□□ 0.98
UBE2D4-209ENST00000454428 USP17L15C9J2P7 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L13C9JLJ4 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L11C9JVI0 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L18D6R9N7 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L22D6RA61 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L17D6RBQ6 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L19D6RCP7 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L20D6RJB6 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 MSCO60682 206 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 BAG3O95817 575 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 USP17L24Q0WX57 530 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 ZYXQ15942 572 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 LBX2Q6XYB7 198 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 TRMT2AQ8IZ69 625 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 ATP11BQ9Y2G3 1177 aa21.14■□□□□ 0.97
UBE2D4-209ENST00000454428 ZNF236Q9UL36 1845 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 PLCG2P16885 1265 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 CCNA1P78396 465 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 ATP2B2Q01814 1243 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 SNX17Q15036 470 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 SLC39A5Q6ZMH5 540 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 BADQ92934 168 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 NOL10Q9BSC4 688 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 CWC22Q9HCG8 908 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 PRKAG2Q9UGJ0 569 aa21.13■□□□□ 0.97
UBE2D4-209ENST00000454428 GLRX3O76003 335 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 CYP2E1P05181 493 aaPredicted RBP21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 UQCRFS1P1P0C7P4 283 aa21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 VCAM1P19320 739 aa21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 DYNLL1P63167 89 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 SMAD3P84022 425 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 WDR78Q5VTH9 848 aa21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 TATDN1Q6P1N9 297 aa21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 SH3RF1Q7Z6J0 888 aa21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 TRIM34Q9BYJ4 488 aa21.12■□□□□ 0.97
UBE2D4-209ENST00000454428 PNMA6EA0A0J9YXQ4 647 aa21.11■□□□□ 0.97
UBE2D4-209ENST00000454428 SPDYE16A6NNV3 312 aaPredicted RBP21.11■□□□□ 0.97
UBE2D4-209ENST00000454428 TRIM60Q495X7 471 aa21.11■□□□□ 0.97
UBE2D4-209ENST00000454428 ACER1Q8TDN7 264 aa21.11■□□□□ 0.97
UBE2D4-209ENST00000454428 PDLIM7Q9NR12 457 aa21.11■□□□□ 0.97
UBE2D4-209ENST00000454428 TRIM43BA6NCK2 446 aa21.1■□□□□ 0.97
UBE2D4-209ENST00000454428 ANO1Q5XXA6 986 aa21.1■□□□□ 0.97
UBE2D4-209ENST00000454428 TRIM43Q96BQ3 446 aaPredicted RBP21.1■□□□□ 0.97
UBE2D4-209ENST00000454428 KIAA1683Q9H0B3 1180 aa21.1■□□□□ 0.97
UBE2D4-209ENST00000454428 A0A0G2JMZ2 1700 aa21.09■□□□□ 0.97
UBE2D4-209ENST00000454428 GNAI3P08754 354 aa21.09■□□□□ 0.97
UBE2D4-209ENST00000454428 ITGB8P26012 769 aa21.09■□□□□ 0.97
UBE2D4-209ENST00000454428 FEZ1Q99689 392 aa21.09■□□□□ 0.97
UBE2D4-209ENST00000454428 PIH1D3Q9NQM4 214 aaKnown RBP21.09■□□□□ 0.97
UBE2D4-209ENST00000454428 PRDM5Q9NQX1 630 aaPredicted RBP21.09■□□□□ 0.97
UBE2D4-209ENST00000454428 HLA-DOAP06340 250 aa21.08■□□□□ 0.97
UBE2D4-209ENST00000454428 OLFML2BQ68BL8 750 aa21.08■□□□□ 0.97
UBE2D4-209ENST00000454428 ARRDC4Q8NCT1 418 aa21.08■□□□□ 0.97
UBE2D4-209ENST00000454428 DBNDD2Q9BQY9 259 aa21.08■□□□□ 0.97
UBE2D4-209ENST00000454428 IVNS1ABPQ9Y6Y0 642 aa21.08■□□□□ 0.97
UBE2D4-209ENST00000454428 FOSL2P15408 326 aa21.07■□□□□ 0.96
UBE2D4-209ENST00000454428 GUCY1A2P33402 732 aa21.07■□□□□ 0.96
UBE2D4-209ENST00000454428 USP14P54578 494 aa21.07■□□□□ 0.96
UBE2D4-209ENST00000454428 EPHB4P54760 987 aa21.07■□□□□ 0.96
UBE2D4-209ENST00000454428 RAB3GAP1Q15042 981 aa21.07■□□□□ 0.96
UBE2D4-209ENST00000454428 RPAP3Q9H6T3 665 aaPredicted RBP21.07■□□□□ 0.96
UBE2D4-209ENST00000454428 KBTBD13C9JR72 458 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 SEPT4O43236 478 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 COBLO75128 1261 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 ADORA2AP29274 412 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 ADCYAP1R1P41586 468 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 ZAP70P43403 619 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 C1orf53Q5VUE5 145 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 USP38Q8NB14 1042 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 MOV10L1Q9BXT6 1211 aaKnown RBP21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 EHD4Q9H223 541 aa21.06■□□□□ 0.96
UBE2D4-209ENST00000454428 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 LRRC41Q15345 812 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 TNNI3KQ59H18 835 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 PRAMEF19Q5SWL8 479 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 ATF7IPQ6VMQ6 1270 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 GPR108Q9NPR9 543 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 SERPINB13Q9UIV8 391 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 FPGT-TNNI3KV9GXZ4 949 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 SMCHD1A6NHR9 2005 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 CHD9Q3L8U1 2897 aa21.05■□□□□ 0.96
UBE2D4-209ENST00000454428 SHMT1P34896 483 aa21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 RARSP54136 660 aaKnown RBP21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 ABCB5Q2M3G0 1257 aa21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 DPP9Q86TI2 863 aa21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 ARHGAP45Q92619 1136 aa21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 FERMT2Q96AC1 680 aa21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 ZNF512BQ96KM6 892 aaPredicted RBP21.04■□□□□ 0.96
UBE2D4-209ENST00000454428 TNNQ9UQP3 1299 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms