RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 SHDQ96IW2 340 aa7.41□□□□□ -1.22
USP25-206ENST00000453553 CCDC74BQ96LY2 380 aa7.41□□□□□ -1.22
USP25-206ENST00000453553 MIPEPQ99797 713 aa7.41□□□□□ -1.22
USP25-206ENST00000453553 ATG3Q9NT62 314 aa7.41□□□□□ -1.22
USP25-206ENST00000453553 NME1P15531 152 aaKnown RBP7.4□□□□□ -1.22
USP25-206ENST00000453553 DUSP27Q5VZP5 1158 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 INTS3Q68E01 1043 aaKnown RBP7.4□□□□□ -1.22
USP25-206ENST00000453553 LETMD1Q6P1Q0 360 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 NLRC3Q7RTR2 1065 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 PHACTR4Q8IZ21 702 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 OR6P1Q8NGX9 317 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 CYB5D2Q8WUJ1 264 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 CEP131Q9UPN4 1083 aa7.4□□□□□ -1.22
USP25-206ENST00000453553 TNFRSF10CO14798 259 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 RGS13O14921 159 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 EOMESO95936 686 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 RAG1P15918 1043 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 FAM214BQ7L5A3 538 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 CDH24Q86UP0 819 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 LSRQ86X29 649 aaPredicted RBP7.39□□□□□ -1.23
USP25-206ENST00000453553 BAHD1Q8TBE0 780 aaPredicted RBP7.39□□□□□ -1.23
USP25-206ENST00000453553 PPP1R13LQ8WUF5 828 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 KIF2CQ99661 725 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 TM9SF2Q99805 663 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
USP25-206ENST00000453553 OSBPL1AQ9BXW6 950 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 TANGO6Q9C0B7 1094 aa7.39□□□□□ -1.23
USP25-206ENST00000453553 GBP1P32455 592 aa7.38□□□□□ -1.23
USP25-206ENST00000453553 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
USP25-206ENST00000453553 ZDHHC13Q8IUH4 622 aa7.38□□□□□ -1.23
USP25-206ENST00000453553 TAB3Q8N5C8 712 aaPredicted RBP7.38□□□□□ -1.23
USP25-206ENST00000453553 DNAJB8Q8NHS0 232 aa7.38□□□□□ -1.23
USP25-206ENST00000453553 ANAPC16Q96DE5 110 aa7.38□□□□□ -1.23
USP25-206ENST00000453553 MRVI1Q9Y6F6 885 aa7.38□□□□□ -1.23
USP25-206ENST00000453553 PRR19A6NJB7 356 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 ATP2B1P20020 1258 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 ETFBP38117 255 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 CCNFP41002 786 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 CPSF6Q16630 551 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP25-206ENST00000453553 MCTP1Q6DN14 999 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 HEXIM2Q96MH2 286 aaKnown RBP7.37□□□□□ -1.23
USP25-206ENST00000453553 SLC9A7Q96T83 725 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 GTF2IRD1Q9UHL9 959 aa7.37□□□□□ -1.23
USP25-206ENST00000453553 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
USP25-206ENST00000453553 ACRP10323 421 aa7.36□□□□□ -1.23
USP25-206ENST00000453553 GUCY2CP25092 1073 aa7.36□□□□□ -1.23
USP25-206ENST00000453553 SF3A1Q15459 793 aaKnown RBP7.36□□□□□ -1.23
USP25-206ENST00000453553 ZNF746Q6NUN9 644 aaPredicted RBP7.36□□□□□ -1.23
USP25-206ENST00000453553 TPX2Q9ULW0 747 aaKnown RBP7.36□□□□□ -1.23
USP25-206ENST00000453553 LEMD3Q9Y2U8 911 aa7.36□□□□□ -1.23
USP25-206ENST00000453553 IGF2BP3O00425 579 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP25-206ENST00000453553 UBOX5O94941 541 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 CYP7A1P22680 504 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
USP25-206ENST00000453553 ETV3P41162 512 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 FAM169BQ8N8A8 192 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 SREK1Q8WXA9 508 aaKnown RBP7.35□□□□□ -1.23
USP25-206ENST00000453553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP25-206ENST00000453553 ZNF408Q9H9D4 720 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 PRDM5Q9NQX1 630 aaPredicted RBP7.35□□□□□ -1.23
USP25-206ENST00000453553 PIM2Q9P1W9 311 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 RNF112Q9ULX5 631 aa7.35□□□□□ -1.23
USP25-206ENST00000453553 CYP26A1O43174 497 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 CASP7P55210 303 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 UNC5AQ6ZN44 842 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 C19orf47Q8N9M1 422 aaKnown RBP7.34□□□□□ -1.23
USP25-206ENST00000453553 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 PRKAG3Q9UGI9 489 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 MAPK8IP1Q9UQF2 711 aa7.34□□□□□ -1.23
USP25-206ENST00000453553 COL17A1Q9UMD9 1497 aaPredicted RBP7.34□□□□□ -1.23
USP25-206ENST00000453553 A0A1W2PQH9 124 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
USP25-206ENST00000453553 CHMP4BP1P59074 171 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 PPP2R5EQ16537 467 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 TTC6Q86TZ1 520 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 TMEM192Q8IY95 271 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 VWCEQ96DN2 955 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 LRRC4CQ9HCJ2 640 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 SLC12A7Q9Y666 1083 aa7.33□□□□□ -1.24
USP25-206ENST00000453553 STK10O94804 968 aaKnown RBP7.32□□□□□ -1.24
USP25-206ENST00000453553 TGFB1P01137 390 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 FOSL1P15407 271 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 GTF2F1P35269 517 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP25-206ENST00000453553 OXCT1P55809 520 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 ZYXQ15942 572 aaKnown RBP7.32□□□□□ -1.24
USP25-206ENST00000453553 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 RNF141Q8WVD5 230 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 ARMC5Q96C12 935 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 DHRS1Q96LJ7 313 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 DRC1Q96MC2 740 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 FBXL18Q96ME1 805 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 MKNK2Q9HBH9 465 aa7.32□□□□□ -1.24
USP25-206ENST00000453553 LTBP3Q9NS15 1303 aa7.31□□□□□ -1.24
USP25-206ENST00000453553 FAM86C2PA6NEL3 165 aa7.31□□□□□ -1.24
USP25-206ENST00000453553 RBAK-RBAKDNI3L0D1 243 aa7.31□□□□□ -1.24
USP25-206ENST00000453553 IGSF3O75054 1194 aa7.31□□□□□ -1.24
USP25-206ENST00000453553 CLEC3AO75596 197 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms