RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 DUSP23Q9BVJ7 150 aa7.65□□□□□ -1.18
HMGB1P26-201ENST00000452520 UBOX5O94941 541 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 PROCP04070 461 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 H2AFB2P0C5Z0 115 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 ZYXQ15942 572 aaKnown RBP7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 LETMD1Q6P1Q0 360 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 OGFOD3Q6PK18 319 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 ZAR1Q86SH2 424 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 HNRNPLLQ8WVV9 542 aaKnown RBP7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 MIPEPQ99797 713 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 ACTR10Q9NZ32 417 aa7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 R3HCC1Q9Y3T6 440 aaKnown RBP7.64□□□□□ -1.19
HMGB1P26-201ENST00000452520 LTBP3Q9NS15 1303 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 MSTNO14793 375 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 LEFTY1O75610 366 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 HMGB1P09429 215 aaKnown RBP7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 HSP90B1P14625 803 aaKnown RBP7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 RAB33AQ14088 237 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 NBPF6Q5VWK0 638 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 RNF43Q68DV7 783 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 CDH24Q86UP0 819 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 SHISA5Q8N114 240 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 TOP6BLQ8N6T0 577 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 DNAJB8Q8NHS0 232 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 NBPF4Q96M43 638 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 TBC1D32Q96NH3 1257 aa7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 PUS7Q96PZ0 661 aaKnown RBP7.63□□□□□ -1.19
HMGB1P26-201ENST00000452520 FAM86C2PA6NEL3 165 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 FAM87AP0C7U9 286 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 NKAPLQ5M9Q1 402 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 TMEM192Q8IY95 271 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 PMFBP1Q8TBY8 1022 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 DHRS1Q96LJ7 313 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 MFSD14AQ96MC6 490 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 SLC12A7Q9Y666 1083 aa7.62□□□□□ -1.19
HMGB1P26-201ENST00000452520 EOMESO95936 686 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 NFIAQ12857 509 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 DPH6Q7L8W6 267 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 FBXL6Q8N531 539 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 COL17A1Q9UMD9 1497 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P26-201ENST00000452520 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 FXNQ16595 210 aa7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 RSPO4Q2I0M5 234 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 FAM177A1Q8N128 213 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 VWCEQ96DN2 955 aa7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 SLC6A18Q96N87 628 aa7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 LNPKQ9C0E8 428 aa7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 PHAXQ9H814 394 aaKnown RBP7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 SIRPGQ9P1W8 387 aa7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 ZNF214Q9UL59 606 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P26-201ENST00000452520 FAM170BA6NMN3 283 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 IGLV1-40P01703 118 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 IGHA1P01876 353 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 F13BP05160 661 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 FSTP19883 344 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 ETV3P41162 512 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 SERINC3Q13530 473 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 CYP27C1Q4G0S4 372 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 LARP1BQ659C4 914 aaKnown RBP7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 CELF2-AS1Q8N7Q2 184 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 MICAL1Q8TDZ2 1067 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 DBNDD2Q9BQY9 259 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 ST7Q9NRC1 585 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 SUCOQ9UBS9 1254 aaKnown RBP7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 PCDHB10Q9UN67 800 aa7.59□□□□□ -1.19
HMGB1P26-201ENST00000452520 U2SURPO15042 1029 aaKnown RBP7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 CLEC3AO75596 197 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 PMS1P54277 932 aaKnown RBP7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 CHMP4BP1P59074 171 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 CYP27A1Q02318 531 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 CCDC144BQ3MJ40 725 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 GNPTABQ3T906 1256 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 DUSP27Q5VZP5 1158 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 ZNF765Q7L2R6 523 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 SLC51AQ86UW1 340 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 HEXIM2Q96MH2 286 aaKnown RBP7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 KREMEN1Q96MU8 473 aa7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
HMGB1P26-201ENST00000452520 WDR64B1ANS9 1081 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 RBAK-RBAKDNI3L0D1 243 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 GSC2O15499 205 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 CYP7A1P22680 504 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 DDR2Q16832 855 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 FBXL18Q96ME1 805 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 PRDM5Q9NQX1 630 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 GTF2IRD1Q9UHL9 959 aa7.57□□□□□ -1.2
HMGB1P26-201ENST00000452520 IGF2BP3O00425 579 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 DYRK3O43781 588 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 DDAH1O94760 285 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 CDK11BP21127 795 aaKnown RBP7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 SLC7A5Q01650 507 aa7.56□□□□□ -1.2
HMGB1P26-201ENST00000452520 BBS9Q3SYG4 887 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms