RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 CCDC91Q7Z6B0 441 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 COG1Q8WTW3 980 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CEP89Q96ST8 783 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 SHOX2O60902 331 aaPredicted RBP19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CD44P16070 742 aaKnown RBP19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 GGCXP38435 758 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CCT5P48643 541 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 SCARF1Q14162 830 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CDKAL1Q5VV42 579 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CTAGE1Q96RT6 745 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 ADAMTSL3P82987 1691 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 UBN2Q6ZU65 1347 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 BTBD18B2RXH4 712 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 GPAA1O43292 621 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 ZAP70P43403 619 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 NTRK3Q16288 839 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 SLF1Q9BQI6 1058 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 SH2B2O14492 632 aaPredicted RBP19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 MCM3P25205 808 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 USP49Q70CQ1 688 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 ISCA1Q9BUE6 129 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 NBPF3Q9H094 633 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 KAT14Q9H8E8 782 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 ABHD10Q9NUJ1 306 aa19.4■□□□□ 0.7
SCUBE2-202ENST00000450649 CUL4BQ13620 913 aa19.39■□□□□ 0.7
SCUBE2-202ENST00000450649 TRAPPC11Q7Z392 1133 aa19.39■□□□□ 0.7
SCUBE2-202ENST00000450649 CYP26C1Q6V0L0 522 aa19.39■□□□□ 0.69
SCUBE2-202ENST00000450649 CABLES1Q8TDN4 633 aa19.39■□□□□ 0.69
SCUBE2-202ENST00000450649 HDAC6Q9UBN7 1215 aa19.39■□□□□ 0.69
SCUBE2-202ENST00000450649 GUCA1BQ9UMX6 200 aa19.39■□□□□ 0.69
SCUBE2-202ENST00000450649 RNF225M0QZC1 329 aaPredicted RBP19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 CDC25AP30304 524 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 FAM76AQ8TAV0 307 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 MMS19Q96T76 1030 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 CRACR2AQ9BSW2 395 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 MYL10Q9BUA6 226 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 TRIM10Q9UDY6 481 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 FAM169AQ9Y6X4 670 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 ITIH6Q6UXX5 1313 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 EBAG9O00559 213 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 ENC1O14682 589 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 ZBTB43O43298 467 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 ZMYND10O75800 440 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 CCT6AP40227 531 aaKnown RBP19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 IRAK1P51617 712 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 SLC26A6Q9BXS9 759 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 MYH8P13535 1937 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 AGPSO00116 658 aa19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 FAM217BQ9NTX9 383 aaPredicted RBP19.38■□□□□ 0.69
SCUBE2-202ENST00000450649 GOLGA8AA7E2F4 631 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 MMP14P50281 582 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 TBC1D10CQ8IV04 446 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 SMYD4Q8IYR2 804 aaPredicted RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 PCDHB6Q9Y5E3 794 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 CASP1P29466 404 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 AFMP43652 599 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 GSCP56915 257 aaPredicted RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 CT47A1Q5JQC4 288 aaPredicted RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 NFXL1Q6ZNB6 911 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 DIS3L2Q8IYB7 885 aaKnown RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 GSPT2Q8IYD1 628 aaKnown RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 ZNF579Q8NAF0 562 aaKnown RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 NUP88Q99567 741 aaPredicted RBP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 KCPQ6ZWJ8 1503 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
SCUBE2-202ENST00000450649 HNRNPH1P31943 449 aaKnown RBP19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 TRIM28Q13263 835 aaKnown RBP19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 DDX17Q92841 729 aaKnown RBP19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 CSRNP2Q9H175 543 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 GOLGA6CA6NDK9 693 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 SEMA3EO15041 775 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 SRGAP2O75044 1071 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 GOLGA6DP0CG33 693 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 MNAT1P51948 309 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 SSRP1Q08945 709 aaKnown RBP19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 FBXW10Q5XX13 1052 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 PLA2G12BQ9BX93 195 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 EHD4Q9H223 541 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 GOLGA6AQ9NYA3 693 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 ECM29Q5VYK3 1845 aa19.36■□□□□ 0.69
SCUBE2-202ENST00000450649 TARSL2A2RTX5 802 aaKnown RBP19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 MMP1P03956 469 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 MYBL2P10244 700 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 SELENOOQ9BVL4 669 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 B4E1Z4 1266 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 COBLO75128 1261 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 CSF1RP07333 972 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 RILPL1Q5EBL4 403 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 PI16Q6UXB8 463 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms