RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 CEP95Q96GE4 821 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 TTC14Q96N46 770 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-210ENST00000449116 KANSL2Q9H9L4 492 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 UNCXA6NJT0 531 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 ST18O60284 1047 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 ICA1Q05084 483 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 VGLL4Q14135 290 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 WTAPQ15007 396 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 SEC23AQ15436 765 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 ANKRD13AQ8IZ07 590 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 C2orf69Q8N8R5 385 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-210ENST00000449116 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 STX8Q9UNK0 236 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 CSADQ9Y600 493 aa17.2■□□□□ 0.34
SHANK2-210ENST00000449116 DOCK1Q14185 1865 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 TTLL1O95922 423 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 LIFRP42702 1097 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 NOVP48745 357 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 ANKRD1Q15327 319 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 LDLRAD1Q5T700 205 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 IFIT1BQ5T764 474 aaKnown RBP17.19■□□□□ 0.34
SHANK2-210ENST00000449116 CST9Q5W186 159 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 LY9Q9HBG7 655 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
SHANK2-210ENST00000449116 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 UBE2Q2LH0YL09 131 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 AK2P54819 239 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 TOB2Q14106 344 aaPredicted RBP17.18■□□□□ 0.34
SHANK2-210ENST00000449116 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 BRF1Q92994 677 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 GPHNQ9NQX3 736 aaPredicted RBP17.18■□□□□ 0.34
SHANK2-210ENST00000449116 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.18■□□□□ 0.34
SHANK2-210ENST00000449116 SNCAIPQ9Y6H5 919 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 ATAD5Q96QE3 1844 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 TRPM7Q96QT4 1865 aa17.18■□□□□ 0.34
SHANK2-210ENST00000449116 OTOFQ9HC10 1997 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
SHANK2-210ENST00000449116 PTPRAP18433 802 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 MKL1Q969V6 931 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 AS3MTQ9HBK9 375 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 ARHGEF10LQ9HCE6 1279 aa17.17■□□□□ 0.34
SHANK2-210ENST00000449116 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 TOP1P11387 765 aaKnown RBP17.16■□□□□ 0.34
SHANK2-210ENST00000449116 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 CCDC84Q86UT8 332 aaPredicted RBP17.16■□□□□ 0.34
SHANK2-210ENST00000449116 SIAH1Q8IUQ4 282 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 CLMNQ96JQ2 1002 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 TMEM47Q9BQJ4 181 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 TBC1D2Q9BYX2 928 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 KAT14Q9H8E8 782 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 ELP3Q9H9T3 547 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
SHANK2-210ENST00000449116 MCM2P49736 904 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 APOBRQ0VD83 1088 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 ERO1BQ86YB8 467 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 WDR18Q9BV38 432 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 ZHX2Q9Y6X8 837 aa17.15■□□□□ 0.34
SHANK2-210ENST00000449116 KLF18A0A0U1RQI7 1052 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 SPDYE5A6NIY4 337 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
SHANK2-210ENST00000449116 ECE1P42892 770 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 HUNKP57058 714 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 EVCP57679 992 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 PPATQ06203 517 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
SHANK2-210ENST00000449116 CATIPQ7Z7H3 387 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
SHANK2-210ENST00000449116 ZNF280CQ8ND82 737 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 PNMA1Q8ND90 353 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 ACER1Q8TDN7 264 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 SNX21Q969T3 373 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
SHANK2-210ENST00000449116 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 TMX2Q9Y320 296 aa17.14■□□□□ 0.33
SHANK2-210ENST00000449116 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 ZNF654Q8IZM8 581 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
SHANK2-210ENST00000449116 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 AFG3L2Q9Y4W6 797 aa17.13■□□□□ 0.33
SHANK2-210ENST00000449116 USP17L10C9JJH3 530 aa17.12■□□□□ 0.33
SHANK2-210ENST00000449116 DDAH1O94760 285 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms