RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CXorf56Q9H5V9 222 aa15.76■□□□□ 0.11
VPS52-212ENST00000445902 IL15P40933 162 aaPredicted RBP15.76■□□□□ 0.11
VPS52-212ENST00000445902 MAP9Q49MG5 647 aa15.76■□□□□ 0.11
VPS52-212ENST00000445902 REXO2Q9Y3B8 237 aaKnown RBP15.76■□□□□ 0.11
VPS52-212ENST00000445902 GNGT1P63211 74 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 SSRP1Q08945 709 aaKnown RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 CUL4BQ13620 913 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 KRT31Q15323 416 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 CYP26C1Q6V0L0 522 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 TRAPPC11Q7Z392 1133 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 TRIML1Q8N9V2 468 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 DDX60Q8IY21 1712 aaKnown RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 FAM205CA6NFA0 338 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 EYA2O00167 538 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 PES1O00541 588 aaKnown RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 CEBPAP49715 358 aaPredicted RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 CDKAL1Q5VV42 579 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 OXER1Q8TDS5 423 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 MYO5AQ9Y4I1 1855 aaKnown RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 GOLGA6BA6NDN3 693 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 MAP2K2P36507 400 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 C2orf54Q08AI8 447 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 TMEM67Q5HYA8 995 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 APPBP2Q92624 585 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
VPS52-212ENST00000445902 MAPK8IP1Q9UQF2 711 aa15.75■□□□□ 0.11
VPS52-212ENST00000445902 TUBBP07437 444 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 SAFBQ15424 915 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS52-212ENST00000445902 LRP10Q7Z4F1 713 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 CAPS2Q9BXY5 557 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 BLZF1Q9H2G9 400 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 CABP5Q9NP86 173 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 SAR1BQ9Y6B6 198 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 SIPA1L3O60292 1781 aaPredicted RBP15.74■□□□□ 0.11
VPS52-212ENST00000445902 IBSPP21815 317 aaPredicted RBP15.74■□□□□ 0.11
VPS52-212ENST00000445902 INPP5BP32019 993 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 SWT1Q5T5J6 900 aaKnown RBP15.74■□□□□ 0.11
VPS52-212ENST00000445902 XAGE2Q96GT9 111 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 CTAGE1Q96RT6 745 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 ZKSCAN3Q9BRR0 538 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 PHF8Q9UPP1 1060 aa15.74■□□□□ 0.11
VPS52-212ENST00000445902 OVOS2A0A0G2JMS6 1433 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 SHOX2O60902 331 aaPredicted RBP15.73■□□□□ 0.11
VPS52-212ENST00000445902 MMP1P03956 469 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 KCNA6P17658 529 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 PSEN1P49768 467 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 CCDC122Q5T0U0 273 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 CEP89Q96ST8 783 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
VPS52-212ENST00000445902 EPN1Q9Y6I3 576 aaPredicted RBP15.73■□□□□ 0.11
VPS52-212ENST00000445902 CAPN7Q9Y6W3 813 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 ARFGEF2Q9Y6D5 1785 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 MYH13Q9UKX3 1938 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 MYO1FO00160 1098 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 NDUFA10O95299 355 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 CEP126Q9P2H0 1117 aa15.73■□□□□ 0.11
VPS52-212ENST00000445902 PPP1R3GB7ZBB8 358 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 PDE2AO00408 941 aaPredicted RBP15.72■□□□□ 0.11
VPS52-212ENST00000445902 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
VPS52-212ENST00000445902 SND1Q7KZF4 910 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS52-212ENST00000445902 JAKMIP2Q96AA8 810 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 CCDC51Q96ER9 411 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 PAGE5Q96GU1 130 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 FAM107BQ9H098 131 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 MYO1AQ9UBC5 1043 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 PPARDQ03181 441 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 SPATA20Q8TB22 786 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 LY9Q9HBG7 655 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 AXIN2Q9Y2T1 843 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 SLC12A7Q9Y666 1083 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 NFAT5O94916 1531 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 MATR3P43243 847 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS52-212ENST00000445902 TTC5Q8N0Z6 440 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 HDAC7Q8WUI4 952 aa15.72■□□□□ 0.11
VPS52-212ENST00000445902 JPH2Q9BR39 696 aaPredicted RBP15.72■□□□□ 0.11
VPS52-212ENST00000445902 SRPRBQ9Y5M8 271 aaKnown RBP15.72■□□□□ 0.11
VPS52-212ENST00000445902 GRIN2DO15399 1336 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 H0YHG0 523 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 IFIT3O14879 490 aaKnown RBP15.71■□□□□ 0.11
VPS52-212ENST00000445902 PPARAQ07869 468 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 RRP12Q5JTH9 1297 aaKnown RBP15.71■□□□□ 0.11
VPS52-212ENST00000445902 KANK3Q6NY19 840 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 CCNI2Q6ZMN8 369 aaPredicted RBP15.71■□□□□ 0.11
VPS52-212ENST00000445902 ELOA2Q8IYF1 753 aaPredicted RBP15.71■□□□□ 0.11
VPS52-212ENST00000445902 IGDCC4Q8TDY8 1250 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 GPR108Q9NPR9 543 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 MYH10P35580 1976 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 COPB1P53618 953 aaKnown RBP15.71■□□□□ 0.11
VPS52-212ENST00000445902 UBXN1Q04323 297 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 PPFIA1Q13136 1202 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 PDCLQ13371 301 aa15.71■□□□□ 0.11
VPS52-212ENST00000445902 RILPL1Q5EBL4 403 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms