RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SPDYE3A6NKU9 549 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 DEXIO95424 95 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 YEATS4O95619 227 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 USH1GQ495M9 461 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
TOP3B-210ENST00000444502 ARGLU1Q9NWB6 273 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-210ENST00000444502 LEMD3Q9Y2U8 911 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 VWA3AA6NCI4 1184 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 NEMFO60524 1076 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 PNOCQ13519 176 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 C6orf50Q9HD87 102 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 ZBTB21Q9ULJ3 1066 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 TRIM28Q13263 835 aaKnown RBP11.98□□□□□ -0.49
TOP3B-210ENST00000444502 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 LEKR1Q6ZMV7 388 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 STRBPQ96SI9 672 aaKnown RBP11.98□□□□□ -0.49
TOP3B-210ENST00000444502 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 TNKSO95271 1327 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
TOP3B-210ENST00000444502 CYB5R4Q7L1T6 521 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 RGPD8O14715 1765 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-210ENST00000444502 ZMYM6O95789 1325 aa11.98□□□□□ -0.49
TOP3B-210ENST00000444502 KRT2P35908 639 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 R3HDM1Q15032 1099 aaKnown RBP11.97□□□□□ -0.49
TOP3B-210ENST00000444502 ELF2Q15723 593 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
TOP3B-210ENST00000444502 PICK1Q9NRD5 415 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 FANCBQ8NB91 859 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 BSDC1Q9NW68 430 aaPredicted RBP11.97□□□□□ -0.49
TOP3B-210ENST00000444502 CCP110O43303 1012 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
TOP3B-210ENST00000444502 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 E2F4Q16254 413 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 LINC00301Q8NCQ3 95 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 PIK3AP1Q6ZUJ8 805 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 SPICE1Q8N0Z3 855 aa11.97□□□□□ -0.49
TOP3B-210ENST00000444502 SEPT11Q9NVA2 429 aaKnown RBP11.97□□□□□ -0.49
TOP3B-210ENST00000444502 PIK3C2AO00443 1686 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 USP17L8P0C7I0 530 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 SLFN14P0C7P3 912 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 CASP7P55210 303 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 KIF23Q02241 960 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-210ENST00000444502 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 BMS1Q14692 1282 aaKnown RBP11.96□□□□□ -0.49
TOP3B-210ENST00000444502 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 MYCBPQ99417 103 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-210ENST00000444502 RTEL1Q9NZ71 1219 aa11.96□□□□□ -0.49
TOP3B-210ENST00000444502 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-210ENST00000444502 SH2B2O14492 632 aaPredicted RBP11.96□□□□□ -0.5
TOP3B-210ENST00000444502 CALML3P27482 149 aa11.96□□□□□ -0.5
TOP3B-210ENST00000444502 EXOSC10Q01780 885 aaKnown RBP11.96□□□□□ -0.5
TOP3B-210ENST00000444502 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.5
TOP3B-210ENST00000444502 NPR1P16066 1061 aa11.96□□□□□ -0.5
TOP3B-210ENST00000444502 MYL5Q02045 173 aa11.96□□□□□ -0.5
TOP3B-210ENST00000444502 NR5A1Q13285 461 aa11.96□□□□□ -0.5
TOP3B-210ENST00000444502 TCERG1LQ5VWI1 586 aa11.96□□□□□ -0.5
TOP3B-210ENST00000444502 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.5
TOP3B-210ENST00000444502 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.5
TOP3B-210ENST00000444502 GYS2P54840 703 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 FANCCQ00597 558 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 DPCR1Q3MIW9 517 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 TMCO3Q6UWJ1 677 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 MB21D2Q8IYB1 491 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-210ENST00000444502 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 CUTAO60888 179 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 MECOMQ03112 1051 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 KANK3Q6NY19 840 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 NOSTRINQ8IVI9 506 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 EHMT1Q9H9B1 1298 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 STAT6P42226 847 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 UBXN4Q92575 508 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 GOLPH3LQ9H4A5 285 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOP3B-210ENST00000444502 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 ZNHIT6Q9NWK9 470 aaKnown RBP11.95□□□□□ -0.5
TOP3B-210ENST00000444502 ARPP21Q9UBL0 812 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-210ENST00000444502 SERTAD1Q9UHV2 236 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 NEDD4P46934 1319 aa11.95□□□□□ -0.5
TOP3B-210ENST00000444502 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CSF1RP07333 972 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 GNA11P29992 359 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 NLRP12P59046 1061 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 ARHGAP29Q52LW3 1261 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 ZSWIM4Q9H7M6 989 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 FEZ2Q9UHY8 353 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms