RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 KLRF2D3W0D1 207 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 ADKP55263 362 aaKnown RBP25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 NCAPH2Q6IBW4 605 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 DNAI2Q9GZS0 605 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 SLFNL1Q499Z3 407 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TTLL11Q8NHH1 800 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TBC1D7Q9P0N9 293 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TUBB4BP68371 445 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TSC1Q92574 1164 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TULP4Q9NRJ4 1543 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 A0A087WWV3 80 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TMTC1Q8IUR5 882 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 ZFP91Q96JP5 570 aaPredicted RBP25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 A0A1W2PQ27 194 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 A0A1W2PQ64 194 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 A0A1W2PQD8 194 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 SLC39A14Q15043 492 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 NAPGQ99747 312 aaPredicted RBP25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 GPHNQ9NQX3 736 aaPredicted RBP25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 FANCLQ9NW38 375 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 PCDHA5Q9Y5H7 936 aa25.09■■□□□ 1.61
CTDSPL-206ENST00000443503 TMEM110-MUSTN1A8MSY1 372 aa25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 BRINP3Q76B58 766 aa25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 MPHOSPH6Q99547 160 aaKnown RBP25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 ELF2Q15723 593 aa25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 LARGE2Q8N3Y3 721 aa25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 EZRP15311 586 aaKnown RBP25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 IMPG2Q9BZV3 1241 aa25.08■■□□□ 1.61
CTDSPL-206ENST00000443503 FAM182BQ5T319 152 aa25.08■■□□□ 1.6
CTDSPL-206ENST00000443503 SLF1Q9BQI6 1058 aa25.08■■□□□ 1.6
CTDSPL-206ENST00000443503 PRPHP41219 470 aa25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 DYNLL1P63167 89 aaKnown RBP25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 SMC1AQ14683 1233 aaKnown RBP25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 ZNF500O60304 480 aaPredicted RBP25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 PTGDRQ13258 359 aa25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 NELFCDQ8IXH7 590 aa25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 EPB41P11171 864 aaKnown RBP25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 RBM6P78332 1123 aaKnown RBP25.07■■□□□ 1.6
CTDSPL-206ENST00000443503 CPXCR1Q8N123 301 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 IFT81Q8WYA0 676 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 RCOR1Q9UKL0 485 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 MED14O60244 1454 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 CFBP00751 764 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 GJC1P36383 396 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 MAPK8IP2Q13387 824 aaPredicted RBP25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 LCORLQ8N3X6 602 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 TEKT1Q969V4 418 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 MRFAP1L1Q96HT8 127 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 SYNCQ9H7C4 482 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 VAV2P52735 878 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 FRMD4BQ9Y2L6 1034 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 ATP8A2Q9NTI2 1148 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 STK32BQ9NY57 414 aa25.06■■□□□ 1.6
CTDSPL-206ENST00000443503 TUBBP07437 444 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 BTDP43251 543 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 HLFQ16534 295 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 ZNF335Q9H4Z2 1342 aaPredicted RBP25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 ERVV-1B6SEH8 477 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 SCNN1DP51172 638 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 LRRC47Q8N1G4 583 aaKnown RBP25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 ATP2B4P23634 1241 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 ERFEQ4G0M1 354 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 FAM212AQ96EL1 285 aa25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.05■■□□□ 1.6
CTDSPL-206ENST00000443503 SNAP23O00161 211 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 KIF23Q02241 960 aaPredicted RBP25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 POLR3EQ9NVU0 708 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 SETBP1Q9Y6X0 1596 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 LRRIQ1Q96JM4 1722 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 POLD1P28340 1107 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 RASGRF1Q13972 1273 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 MICALCLQ6ZW33 695 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 KIAA0825Q8IV33 1275 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 PIH1D3Q9NQM4 214 aaKnown RBP25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 ZSWIM5Q9P217 1185 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 NCAPD2Q15021 1401 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 JAKMIP2Q96AA8 810 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 DNM3Q9UQ16 869 aa25.04■■□□□ 1.6
CTDSPL-206ENST00000443503 ALDH1B1P30837 517 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 LINC00301Q8NCQ3 95 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 AIFM3Q96NN9 605 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 NUP58Q9BVL2 599 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 GJA3Q9Y6H8 435 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 FRMPD2Q68DX3 1309 aaPredicted RBP25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 CAPN2P17655 700 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 ACTN2P35609 894 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 DDAH1O94760 285 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 SYNE4Q8N205 404 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 TSGA10Q9BZW7 698 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 VPS18Q9P253 973 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 NRBP1Q9UHY1 535 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 APBA3O96018 575 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 MAGEA1P43355 309 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 DOK7Q18PE1 504 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 MAEAQ7L5Y9 396 aa25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 FAM207AQ9NSI2 230 aaPredicted RBP25.03■■□□□ 1.6
CTDSPL-206ENST00000443503 TECP42680 631 aa25.02■■□□□ 1.6
CTDSPL-206ENST00000443503 DPCR1Q3MIW9 517 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms