RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZSCAN25Q6NSZ9 544 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 AMOTL1Q8IY63 956 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 LCORLQ8N3X6 602 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 CCDC136Q96JN2 1154 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 DCTPP1Q9H773 170 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 MPHOSPH10O00566 681 aaKnown RBP10.54□□□□□ -0.72
USP6NL-203ENST00000443016 MBD4O95243 580 aa10.54□□□□□ -0.72
USP6NL-203ENST00000443016 ADD2P35612 726 aa10.54□□□□□ -0.72
USP6NL-203ENST00000443016 ZYXQ15942 572 aaKnown RBP10.54□□□□□ -0.72
USP6NL-203ENST00000443016 TATDN1Q6P1N9 297 aa10.54□□□□□ -0.72
USP6NL-203ENST00000443016 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
USP6NL-203ENST00000443016 TCRBV5S4A2TA0A5A2 114 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 FLT3LGP49771 235 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 UBXN2AP68543 259 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
USP6NL-203ENST00000443016 DCP1AQ9NPI6 582 aaPredicted RBP10.53□□□□□ -0.72
USP6NL-203ENST00000443016 ZSWIM8A7E2V4 1837 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 GABRQQ9UN88 632 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 PTPRFP10586 1907 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 PHIPQ8WWQ0 1821 aa10.53□□□□□ -0.72
USP6NL-203ENST00000443016 ADCY3O60266 1144 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 UBE3CQ15386 1083 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 MTFR1Q15390 333 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 TSHZ3Q63HK5 1081 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 RNF208Q9H0X6 261 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 ATP8A2Q9NTI2 1148 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 ATAD5Q96QE3 1844 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 CDK5RAP2Q96SN8 1893 aa10.52□□□□□ -0.72
USP6NL-203ENST00000443016 FOCADQ5VW36 1801 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 PRKAB2O43741 272 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-203ENST00000443016 SHMT1P34896 483 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 USP14P54578 494 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 HERVK_113P62684 666 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 P2RX7Q99572 595 aaKnown RBP10.52□□□□□ -0.73
USP6NL-203ENST00000443016 GZF1Q9H116 711 aaPredicted RBP10.52□□□□□ -0.73
USP6NL-203ENST00000443016 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 SLC4A4Q9Y6R1 1079 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 MYH1P12882 1939 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 SIPA1L1O43166 1804 aa10.52□□□□□ -0.73
USP6NL-203ENST00000443016 CHGBP05060 677 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 ELNP15502 786 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 TMCO4Q5TGY1 634 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
USP6NL-203ENST00000443016 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
USP6NL-203ENST00000443016 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
USP6NL-203ENST00000443016 GPRC5AQ8NFJ5 357 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
USP6NL-203ENST00000443016 SWAP70Q9UH65 585 aa10.51□□□□□ -0.73
USP6NL-203ENST00000443016 ERC2O15083 957 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 CYP2D6P10635 497 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 CCL5P13501 91 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 EVX2Q03828 476 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 GABPAQ06546 454 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 SEPT2Q15019 361 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 ACER1Q8TDN7 264 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 PUS7LQ9H0K6 701 aaKnown RBP10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L21D6R901 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 PDE4CQ08493 712 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 LRRFIP1Q32MZ4 808 aaKnown RBP10.5□□□□□ -0.73
USP6NL-203ENST00000443016 KBTBD3Q8NAB2 608 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 PXYLP1Q8TE99 480 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 DYNLL2Q96FJ2 89 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 KIAA1683Q9H0B3 1180 aa10.5□□□□□ -0.73
USP6NL-203ENST00000443016 RANBP2P49792 3224 aaKnown RBP10.49□□□□□ -0.73
USP6NL-203ENST00000443016 INHAP05111 366 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 VCAM1P19320 739 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 IRF5Q13568 498 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 GTF3C2Q8WUA4 911 aaPredicted RBP10.49□□□□□ -0.73
USP6NL-203ENST00000443016 MORF4L1Q9UBU8 362 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 LOC285556D6RIA3 1793 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 CYP2D7A0A087X1C5 515 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 PEX10O60683 326 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 GJB1P08034 283 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 C12orf60Q5U649 245 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 WDR78Q5VTH9 848 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 TMEM179Q6ZVK1 233 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 TXNRD2Q9NNW7 524 aa10.49□□□□□ -0.73
USP6NL-203ENST00000443016 TTC41PQ6P2S7 1318 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 APPP05067 770 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ERVK-24P63145 666 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms