RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TMCO3Q6UWJ1 677 aa17.54■□□□□ 0.4
APP-208ENST00000439274 TRIML1Q8N9V2 468 aa17.54■□□□□ 0.4
APP-208ENST00000439274 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
APP-208ENST00000439274 A0A0U1RQJ8 604 aa17.53■□□□□ 0.4
APP-208ENST00000439274 COBLO75128 1261 aa17.53■□□□□ 0.4
APP-208ENST00000439274 PLEKHA8P1O95397 391 aa17.53■□□□□ 0.4
APP-208ENST00000439274 PKN1Q16512 942 aa17.53■□□□□ 0.4
APP-208ENST00000439274 TMTC2Q8N394 836 aa17.53■□□□□ 0.4
APP-208ENST00000439274 CPLX3Q8WVH0 158 aa17.53■□□□□ 0.4
APP-208ENST00000439274 ATRIPQ8WXE1 791 aa17.53■□□□□ 0.4
APP-208ENST00000439274 KIFC2Q96AC6 838 aa17.53■□□□□ 0.4
APP-208ENST00000439274 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
APP-208ENST00000439274 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
APP-208ENST00000439274 A0A1B0GTH6 734 aa17.53■□□□□ 0.4
APP-208ENST00000439274 TRIM75PA6NK02 468 aa17.53■□□□□ 0.4
APP-208ENST00000439274 MAP3K9P80192 1104 aa17.53■□□□□ 0.4
APP-208ENST00000439274 APTXQ7Z2E3 356 aaKnown RBP17.53■□□□□ 0.4
APP-208ENST00000439274 SYMPKQ92797 1274 aaKnown RBP17.53■□□□□ 0.4
APP-208ENST00000439274 ARGLU1Q9NWB6 273 aaPredicted RBP17.53■□□□□ 0.4
APP-208ENST00000439274 AKAP17AQ02040 695 aaKnown RBP17.52■□□□□ 0.4
APP-208ENST00000439274 PPP2R3AQ06190 1150 aa17.52■□□□□ 0.4
APP-208ENST00000439274 TEX35Q5T0J7 233 aa17.52■□□□□ 0.4
APP-208ENST00000439274 KANK3Q6NY19 840 aa17.52■□□□□ 0.4
APP-208ENST00000439274 ENAHQ8N8S7 591 aaPredicted RBP17.52■□□□□ 0.4
APP-208ENST00000439274 STAMQ92783 540 aa17.52■□□□□ 0.4
APP-208ENST00000439274 MRFAP1Q9Y605 127 aa17.52■□□□□ 0.4
APP-208ENST00000439274 ERICH4A6NGS2 130 aa17.52■□□□□ 0.39
APP-208ENST00000439274 CHRNDQ07001 517 aa17.52■□□□□ 0.39
APP-208ENST00000439274 PAGE5Q96GU1 130 aa17.52■□□□□ 0.39
APP-208ENST00000439274 RNF26Q9BY78 433 aaPredicted RBP17.52■□□□□ 0.39
APP-208ENST00000439274 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.39
APP-208ENST00000439274 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.39
APP-208ENST00000439274 SPATA31A1Q5TZJ5 1347 aa17.52■□□□□ 0.39
APP-208ENST00000439274 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.39
APP-208ENST00000439274 ERCC5P28715 1186 aaPredicted RBP17.51■□□□□ 0.39
APP-208ENST00000439274 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
APP-208ENST00000439274 RBL2Q08999 1139 aa17.51■□□□□ 0.39
APP-208ENST00000439274 ESR2Q92731 530 aa17.51■□□□□ 0.39
APP-208ENST00000439274 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
APP-208ENST00000439274 SYNRGQ9UMZ2 1314 aa17.51■□□□□ 0.39
APP-208ENST00000439274 GOLGA6L9A6NEM1 432 aa17.51■□□□□ 0.39
APP-208ENST00000439274 AKR1B15C9JRZ8 316 aaPredicted RBP17.51■□□□□ 0.39
APP-208ENST00000439274 KRT2P35908 639 aa17.51■□□□□ 0.39
APP-208ENST00000439274 GYG1P46976 350 aa17.51■□□□□ 0.39
APP-208ENST00000439274 DYNLL1P63167 89 aaKnown RBP17.51■□□□□ 0.39
APP-208ENST00000439274 ZNF174Q15697 407 aa17.51■□□□□ 0.39
APP-208ENST00000439274 RAD9BQ6WBX8 426 aa17.51■□□□□ 0.39
APP-208ENST00000439274 PHF20Q9BVI0 1012 aa17.51■□□□□ 0.39
APP-208ENST00000439274 LZTFL1Q9NQ48 299 aa17.51■□□□□ 0.39
APP-208ENST00000439274 MYH6P13533 1939 aa17.51■□□□□ 0.39
APP-208ENST00000439274 COL4A1P02462 1669 aa17.5■□□□□ 0.39
APP-208ENST00000439274 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
APP-208ENST00000439274 EIF5P55010 431 aaKnown RBP17.5■□□□□ 0.39
APP-208ENST00000439274 EVX2Q03828 476 aa17.5■□□□□ 0.39
APP-208ENST00000439274 FUT2Q10981 343 aa17.5■□□□□ 0.39
APP-208ENST00000439274 CUL4BQ13620 913 aa17.5■□□□□ 0.39
APP-208ENST00000439274 IGSF22Q8N9C0 903 aa17.5■□□□□ 0.39
APP-208ENST00000439274 SASH3O75995 380 aa17.5■□□□□ 0.39
APP-208ENST00000439274 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
APP-208ENST00000439274 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
APP-208ENST00000439274 AK7Q96M32 723 aa17.5■□□□□ 0.39
APP-208ENST00000439274 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
APP-208ENST00000439274 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
APP-208ENST00000439274 RCAN1P53805 252 aa17.49■□□□□ 0.39
APP-208ENST00000439274 DPYDQ12882 1025 aa17.49■□□□□ 0.39
APP-208ENST00000439274 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
APP-208ENST00000439274 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
APP-208ENST00000439274 SH3RF1Q7Z6J0 888 aa17.49■□□□□ 0.39
APP-208ENST00000439274 ZSWIM4Q9H7M6 989 aa17.49■□□□□ 0.39
APP-208ENST00000439274 IFIT1BQ5T764 474 aaKnown RBP17.49■□□□□ 0.39
APP-208ENST00000439274 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
APP-208ENST00000439274 MYH2Q9UKX2 1941 aa17.48■□□□□ 0.39
APP-208ENST00000439274 POLR3GO15318 223 aaPredicted RBP17.48■□□□□ 0.39
APP-208ENST00000439274 XBP1P17861 261 aa17.48■□□□□ 0.39
APP-208ENST00000439274 BLZF1Q9H2G9 400 aa17.48■□□□□ 0.39
APP-208ENST00000439274 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
APP-208ENST00000439274 PPP1R3GB7ZBB8 358 aa17.48■□□□□ 0.39
APP-208ENST00000439274 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
APP-208ENST00000439274 CCDC175P0C221 793 aa17.48■□□□□ 0.39
APP-208ENST00000439274 RSRC2Q7L4I2 434 aaKnown RBP17.48■□□□□ 0.39
APP-208ENST00000439274 PPFIBP1Q86W92 1011 aa17.48■□□□□ 0.39
APP-208ENST00000439274 PANX2Q96RD6 677 aa17.48■□□□□ 0.39
APP-208ENST00000439274 RIOK1Q9BRS2 568 aaKnown RBP17.48■□□□□ 0.39
APP-208ENST00000439274 NIP7Q9Y221 180 aaKnown RBP eCLIP17.48■□□□□ 0.39
APP-208ENST00000439274 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
APP-208ENST00000439274 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
APP-208ENST00000439274 COL1A1P02452 1464 aaPredicted RBP17.47■□□□□ 0.39
APP-208ENST00000439274 EXOC5O00471 708 aa17.47■□□□□ 0.39
APP-208ENST00000439274 PRPF3O43395 683 aaKnown RBP17.47■□□□□ 0.39
APP-208ENST00000439274 NPY5RQ15761 445 aa17.47■□□□□ 0.39
APP-208ENST00000439274 CDKAL1Q5VV42 579 aa17.47■□□□□ 0.39
APP-208ENST00000439274 CC2D1AQ6P1N0 951 aaPredicted RBP17.47■□□□□ 0.39
APP-208ENST00000439274 CATIPQ7Z7H3 387 aa17.47■□□□□ 0.39
APP-208ENST00000439274 ANAPC4Q9UJX5 808 aa17.47■□□□□ 0.39
APP-208ENST00000439274 CTNND2Q9UQB3 1225 aa17.47■□□□□ 0.39
APP-208ENST00000439274 ADGRG1Q9Y653 693 aa17.47■□□□□ 0.39
APP-208ENST00000439274 CICQ96RK0 1608 aaPredicted RBP17.47■□□□□ 0.39
APP-208ENST00000439274 ADAMTS3O15072 1205 aa17.47■□□□□ 0.39
APP-208ENST00000439274 NTSR2O95665 410 aa17.47■□□□□ 0.39
APP-208ENST00000439274 TPM1P09493 284 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms