RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 GTF3C2Q8WUA4 911 aaPredicted RBP7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 DPF3Q92784 378 aa7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 EDC3Q96F86 508 aaKnown RBP7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 PAWRQ96IZ0 340 aaKnown RBP7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 DCP1AQ9NPI6 582 aaPredicted RBP7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 OGDHLQ9ULD0 1010 aa7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 DDX19BQ9UMR2 479 aa7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 COG6Q9Y2V7 657 aa7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 ZNF532Q9HCE3 1301 aa7.51□□□□□ -1.21
PNKDP1-201ENST00000435914 BAZ2AQ9UIF9 1905 aaKnown RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 ZNF236Q9UL36 1845 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 COL6A3P12111 3177 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L15C9J2P7 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L13C9JLJ4 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L11C9JVI0 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L18D6R9N7 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L22D6RA61 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L17D6RBQ6 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L19D6RCP7 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L20D6RJB6 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 SMIM22K7EJ46 135 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 TFRCP02786 760 aaKnown RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 CHGBP05060 677 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 MS4A1P11836 297 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 ATP5JP18859 108 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 VCAM1P19320 739 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 CYP2B6P20813 491 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 MAPK4P31152 587 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 TTF1Q15361 905 aaPredicted RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 ABCB5Q2M3G0 1257 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 SLFNL1Q499Z3 407 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 CERKLQ49MI3 558 aaPredicted RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 SLC9C2Q5TAH2 1124 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 LHX8Q68G74 356 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 GPR142Q7Z601 462 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 SIAH1Q8IUQ4 282 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 CLASRPQ8N2M8 674 aaKnown RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 SDR42E1Q8WUS8 393 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 SOCS4Q8WXH5 440 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 NUDT12Q9BQG2 462 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 TRIM34Q9BYJ4 488 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 HMX1Q9NP08 348 aaPredicted RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 BTBD7Q9P203 1132 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 TAOK2Q9UL54 1235 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 RABGAP1Q9Y3P9 1069 aa7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 GREB1LQ9C091 1923 aaPredicted RBP7.5□□□□□ -1.21
PNKDP1-201ENST00000435914 LAMA2P24043 3122 aaKnown RBP7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 MYH8P13535 1937 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 SPDYE16A6NNV3 312 aaPredicted RBP7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 GOLIM4O00461 696 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 HOXC6P09630 235 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 CYP2D6P10635 497 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 COL6A1P12109 1028 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 PRKAR2AP13861 404 aaKnown RBP7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 ADD2P35612 726 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 USP14P54578 494 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 CACNB2Q08289 660 aaPredicted RBP7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 SEPT2Q15019 361 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 ZYXQ15942 572 aaKnown RBP7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 CCL14Q16627 93 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 KIAA1755Q5JYT7 1200 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 C20orf194Q5TEA3 1177 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 NECAB2Q7Z6G3 386 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 SLC44A5Q8NCS7 719 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 HAUS7Q99871 368 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 GDF15Q99988 308 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 CRNKL1Q9BZJ0 848 aaKnown RBP7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 NR2E3Q9Y5X4 410 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 PFASO15067 1338 aa7.49□□□□□ -1.21
PNKDP1-201ENST00000435914 A0A1W2PPC1 479 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 APBB1O00213 710 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 PRKAB2O43741 272 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 HMMRO75330 724 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 POLR3DP05423 398 aaPredicted RBP7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 IFIT2P09913 472 aaKnown RBP7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 PTPREP23469 700 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 RGS2P41220 211 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 GRB14Q14449 540 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 RAB3GAP1Q15042 981 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 UBE3CQ15386 1083 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 TRMT44Q8IYL2 757 aaKnown RBP7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 DYNLL2Q96FJ2 89 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 DNAJC2Q99543 621 aaKnown RBP7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 FEZ1Q99689 392 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 APBA2Q99767 749 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 PAGR1Q9BTK6 254 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 NBPF3Q9H094 633 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 BOLA2Q9H3K6 86 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 RPAP3Q9H6T3 665 aaPredicted RBP7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 ARMT1Q9H993 441 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 PAG1Q9NWQ8 432 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 MCM9Q9NXL9 1143 aa7.48□□□□□ -1.21
PNKDP1-201ENST00000435914 FLRT1Q9NZU1 646 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms