RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ACTN4O43707 911 aaKnown RBP11.9□□□□□ -0.5
CD44-210ENST00000434472 KIF5BP33176 963 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 PLCD1P51178 756 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 VPS72Q15906 364 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 SPATA20Q8TB22 786 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 ERO1AQ96HE7 468 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.5
CD44-210ENST00000434472 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 LTBP4Q8N2S1 1624 aa11.9□□□□□ -0.5
CD44-210ENST00000434472 ZSCAN12O43309 604 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 PLEKHA8P1O95397 391 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 ATP2B1P20020 1258 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
CD44-210ENST00000434472 GSTO1P78417 241 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 NCBP1Q09161 790 aaKnown RBP11.89□□□□□ -0.51
CD44-210ENST00000434472 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 E4F1Q66K89 784 aaPredicted RBP11.89□□□□□ -0.51
CD44-210ENST00000434472 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 TMX1Q9H3N1 280 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
CD44-210ENST00000434472 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 CYP2D7A0A087X1C5 515 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 GOLGA6L9A6NEM1 432 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 FOXN1O15353 648 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 SLFN14P0C7P3 912 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 CALML3P27482 149 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 GNAQP50148 359 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 GRIN1Q05586 938 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
CD44-210ENST00000434472 TTC38Q5R3I4 469 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 SH3RF1Q7Z6J0 888 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 WDR66Q8TBY9 1149 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 DPF2Q92785 391 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 FEZ1Q99689 392 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 MYH6P13533 1939 aa11.89□□□□□ -0.51
CD44-210ENST00000434472 LAMB1P07942 1786 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 ARHGAP6O43182 974 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 PRDM1O75626 825 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
CD44-210ENST00000434472 SCG2P13521 617 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 ZNF18P17022 549 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 BMP6P22004 513 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 NLRP5P59047 1200 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 TBX2Q13207 712 aaPredicted RBP11.88□□□□□ -0.51
CD44-210ENST00000434472 PPP4R3BQ5MIZ7 849 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
CD44-210ENST00000434472 CERS3Q8IU89 383 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
CD44-210ENST00000434472 ANKS1AQ92625 1134 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 GSDMAQ96QA5 445 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 LEMD3Q9Y2U8 911 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
CD44-210ENST00000434472 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 CASZ1Q86V15 1759 aa11.88□□□□□ -0.51
CD44-210ENST00000434472 TSPY2A6NKD2 308 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 TOM1O60784 492 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 LDHCP07864 332 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
CD44-210ENST00000434472 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
CD44-210ENST00000434472 SPATA1Q5VX52 437 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
CD44-210ENST00000434472 DHX58Q96C10 678 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 TFCP2L1Q9NZI6 479 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 PHLPP2Q6ZVD8 1323 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
CD44-210ENST00000434472 MYH13Q9UKX3 1938 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 BAG3O95817 575 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 PDILTQ8N807 584 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 L2HGDHQ9H9P8 463 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 MYH2Q9UKX2 1941 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 WTIPA6NIX2 430 aaPredicted RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 GNPATO15228 680 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 STX10O60499 249 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 LDHBP07195 334 aaKnown RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 KLRK1P26718 216 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 PRDX5P30044 214 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 TM4SF1P30408 202 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 USP5P45974 858 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 ETF1P62495 437 aaKnown RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.51
CD44-210ENST00000434472 ZNF174Q15697 407 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 ARL6IP4Q66PJ3 421 aaKnown RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 GALNT17Q6IS24 598 aa11.86□□□□□ -0.51
CD44-210ENST00000434472 C15orf52Q6ZUT6 534 aaKnown RBP11.86□□□□□ -0.51
CD44-210ENST00000434472 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms