RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 TEX33O43247 280 aa8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 HNRNPH1P31943 449 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 GGCXP38435 758 aa8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 MRPS25P82663 173 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 PDE4BQ07343 736 aa8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 FAM98CQ17RN3 349 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 SLC26A6Q9BXS9 759 aa8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 SERTAD1Q9UHV2 236 aa8.35□□□□□ -1.07
SYNPO2-203ENST00000434046 USP42Q9H9J4 1324 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 IFIT3O14879 490 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 XBP1P17861 261 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 ZAP70P43403 619 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 SLC39A14Q15043 492 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 RAD9BQ6WBX8 426 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 CNGA4Q8IV77 575 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 ALDH8A1Q9H2A2 487 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 MROH7-TTC4A0A0A0MT08 1334 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 SRGAP2O75044 1071 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 NEBLO76041 1014 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KCTD16Q68DU8 428 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KRT40Q6A162 431 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 NBPF5PQ86XG9 351 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KRI1Q8N9T8 703 aaKnown RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 APPBP2Q92624 585 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 STAMQ92783 540 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 ZNF274Q96GC6 653 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 PSMB7Q99436 277 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 UBXN6Q9BZV1 441 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KAT14Q9H8E8 782 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 NWD1Q149M9 1564 aa8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 RGPD8O14715 1765 aaPredicted RBP8.34□□□□□ -1.07
SYNPO2-203ENST00000434046 KRT9P35527 623 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 CTSWP56202 376 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 TUBB2AQ13885 445 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MICALCLQ6ZW33 695 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MLKLQ8NB16 471 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 HNRNPLLQ8WVV9 542 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 CNKSR2Q8WXI2 1034 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 TUBB2BQ9BVA1 445 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 PIK3C2AO00443 1686 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 DLG5Q8TDM6 1919 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MACROD2A1Z1Q3 448 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 HSF2BPO75031 334 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 KIF23Q02241 960 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 CABS1Q96KC9 395 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 EHD4Q9H223 541 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 GREM2Q9H772 168 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 ZNHIT6Q9NWK9 470 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 HDAC6Q9UBN7 1215 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MAN1B1Q9UKM7 699 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 PEAK1Q9H792 1746 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MEGF6O75095 1541 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 GOLGA6L7A0A1B0GV03 622 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 GOLGA8AA7E2F4 631 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 GPAA1O43292 621 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 HSPD1P10809 573 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 CALRP27797 417 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 CKAP4Q07065 602 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 TMEM67Q5HYA8 995 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 IQCEQ6IPM2 695 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 CCDC114Q96M63 670 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 MAPK8IP1Q9UQF2 711 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 SLC12A7Q9Y666 1083 aa8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 SETD1AO15047 1707 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-203ENST00000434046 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CCDC196A0A1B0GTZ2 297 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 OPA1O60313 960 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 FDPSP14324 419 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 ADORA1P30542 326 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 SIK1P57059 783 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 PDCLQ13371 301 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 NAA25Q14CX7 972 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 TSGA10IPQ3SY00 556 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 SHC4Q6S5L8 630 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 B4GALNT4Q76KP1 1039 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 METTL16Q86W50 562 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 N4BP2L2Q92802 583 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 ZNF622Q969S3 477 aaKnown RBP eCLIP8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 CEP89Q96ST8 783 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 TAB2Q9NYJ8 693 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 ANKIB1Q9P2G1 1089 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 WWC3Q9ULE0 1092 aa8.32□□□□□ -1.08
SYNPO2-203ENST00000434046 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms