RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LMCD1Q9NZU5 365 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 CECR2Q9BXF3 1484 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 YARSP54577 528 aaKnown RBP8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 TNK2Q07912 1038 aa8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 MPP2Q14168 576 aa8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 FBXO27Q8NI29 283 aa8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 UBE2FQ969M7 185 aa8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 ZSWIM5Q9P217 1185 aa8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 REV1Q9UBZ9 1251 aa8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P5-201ENST00000428894 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
HMGB3P5-201ENST00000428894 PPP1R13LQ8WUF5 828 aa8.49□□□□□ -1.05
HMGB3P5-201ENST00000428894 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
HMGB3P5-201ENST00000428894 PRR36Q9H6K5 1346 aa8.49□□□□□ -1.05
HMGB3P5-201ENST00000428894 CARMIL2Q6F5E8 1435 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 CHURC1-FNTBB4DL54 471 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 HTR3BO95264 441 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 FBXL19Q6PCT2 694 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 FAM196AQ6ZSG2 479 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 THAP5Q7Z6K1 395 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 KLHL3Q9UH77 587 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 GGT7Q9UJ14 662 aa8.48□□□□□ -1.05
HMGB3P5-201ENST00000428894 CC2D2AQ9P2K1 1620 aa8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 SHROOM4Q9ULL8 1493 aa8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 EIF4A3P38919 411 aaKnown RBP8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 OGFOD2Q6N063 350 aa8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 REC114Q7Z4M0 266 aa8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 PIWIL2Q8TC59 973 aaKnown RBP8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 FAM168AQ92567 244 aa8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 Q96M66 194 aa8.47□□□□□ -1.05
HMGB3P5-201ENST00000428894 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 HS2ST1Q7LGA3 356 aa8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 SLFN12Q8IYM2 578 aa8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 FLAD1Q8NFF5 587 aa8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 CTNND2Q9UQB3 1225 aa8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 ROBO2Q9HCK4 1378 aa8.46□□□□□ -1.06
HMGB3P5-201ENST00000428894 GREM1O60565 184 aa8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 TNNI2P48788 182 aa8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 BAHD1Q8TBE0 780 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 KCNQ5Q9NR82 932 aa8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P5-201ENST00000428894 WASH4PA8MWX3 477 aa8.44□□□□□ -1.06
HMGB3P5-201ENST00000428894 TMEM87AQ8NBN3 555 aa8.44□□□□□ -1.06
HMGB3P5-201ENST00000428894 CCDC74BQ96LY2 380 aa8.44□□□□□ -1.06
HMGB3P5-201ENST00000428894 DUSP15Q9H1R2 295 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P5-201ENST00000428894 BRMS1Q9HCU9 246 aa8.44□□□□□ -1.06
HMGB3P5-201ENST00000428894 DNAJA2O60884 412 aa8.43□□□□□ -1.06
HMGB3P5-201ENST00000428894 MFAP1P55081 439 aaKnown RBP8.43□□□□□ -1.06
HMGB3P5-201ENST00000428894 MLECQ14165 292 aa8.43□□□□□ -1.06
HMGB3P5-201ENST00000428894 PHACTR4Q8IZ21 702 aa8.43□□□□□ -1.06
HMGB3P5-201ENST00000428894 LRRC3Q9BY71 257 aa8.43□□□□□ -1.06
HMGB3P5-201ENST00000428894 KCNH3Q9ULD8 1083 aa8.43□□□□□ -1.06
HMGB3P5-201ENST00000428894 LRRN2O75325 713 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 TPP2P29144 1249 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 AFMP43652 599 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 TMPRSS7Q7RTY8 843 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 POU5F2Q8N7G0 328 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 DTWD2Q8NBA8 298 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 RNF141Q8WVD5 230 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 KREMEN1Q96MU8 473 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 KIF2CQ99661 725 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 TRIT1Q9H3H1 467 aaKnown RBP8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 ADAMTS1Q9UHI8 967 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 PCDHB14Q9Y5E9 798 aa8.42□□□□□ -1.06
HMGB3P5-201ENST00000428894 ESR1P03372 595 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 GBP1P32455 592 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 KCNMB1Q16558 191 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 LCE3BQ5TA77 95 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 FYB2Q5VWT5 728 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 ZSWIM9Q86XI8 627 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 CREG2Q8IUH2 290 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 TMEM40Q8WWA1 233 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 ALPK1Q96QP1 1244 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 GPR62Q9BZJ7 368 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 GPATCH2Q9NW75 528 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 SLAMF8Q9P0V8 285 aa8.41□□□□□ -1.06
HMGB3P5-201ENST00000428894 SLC22A31A6NKX4 558 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 YBX3P16989 372 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 GDNFP39905 211 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 CRKP46108 304 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 SEZ6Q53EL9 994 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 LDLRAD1Q5T700 205 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 CCDC120Q96HB5 630 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 UBP1Q9NZI7 540 aa8.4□□□□□ -1.06
HMGB3P5-201ENST00000428894 ATE1O95260 518 aa8.39□□□□□ -1.07
HMGB3P5-201ENST00000428894 SRFP11831 508 aa8.39□□□□□ -1.07
HMGB3P5-201ENST00000428894 CHMP4BP1P59074 171 aa8.39□□□□□ -1.07
HMGB3P5-201ENST00000428894 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
HMGB3P5-201ENST00000428894 EIF4G1Q04637 1599 aaKnown RBP8.39□□□□□ -1.07
HMGB3P5-201ENST00000428894 RGS13O14921 159 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 APOBRQ0VD83 1088 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 GAB4Q2WGN9 574 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms