RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 OGFRQ9NZT2 677 aa12.06□□□□□ -0.48
TCOF1-204ENST00000427724 FRMPD1Q5SYB0 1578 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 USP14P54578 494 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 MECOMQ03112 1051 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 NKX1-1Q15270 411 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-204ENST00000427724 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 FILIP1LQ4L180 1135 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 COA7Q96BR5 231 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 CCPG1Q9ULG6 757 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 CIAO1O76071 339 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 EPHX2P34913 555 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 ECE1P42892 770 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 CEP135Q66GS9 1140 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
TCOF1-204ENST00000427724 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 RGS12O14924 1447 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 GH2P01242 217 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 HARSP12081 509 aaKnown RBP12.05□□□□□ -0.48
TCOF1-204ENST00000427724 AKNAD1Q5T1N1 836 aa12.05□□□□□ -0.48
TCOF1-204ENST00000427724 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
TCOF1-204ENST00000427724 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 JAK2O60674 1132 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 SKILP12757 684 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 HOXD10P28358 340 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 PPM1FP49593 454 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-204ENST00000427724 SETQ01105 290 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-204ENST00000427724 TAF12Q16514 161 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 Q3C1V9 767 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 M0QZ92 97 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 ARHGEF16Q5VV41 709 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
TCOF1-204ENST00000427724 AP5M1Q9H0R1 490 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 ATP8A2Q9NTI2 1148 aa12.04□□□□□ -0.48
TCOF1-204ENST00000427724 PDE4DQ08499 809 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 SCARF1Q14162 830 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 FOXP4Q8IVH2 680 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-204ENST00000427724 UBE2Q2LH0YL09 131 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 PRKAB2O43741 272 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 AOPEPQ8N6M6 819 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 DYNLL2Q96FJ2 89 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 WDR70Q9NW82 654 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 SMTNL1A8MU46 457 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-204ENST00000427724 DNAI2Q9GZS0 605 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 KANSL2Q9H9L4 492 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
TCOF1-204ENST00000427724 A0A0D9SFI3 127 aa12.03□□□□□ -0.48
TCOF1-204ENST00000427724 TNPO2O14787 897 aaKnown RBP12.03□□□□□ -0.48
TCOF1-204ENST00000427724 CYP2D7A0A087X1C5 515 aa12.02□□□□□ -0.48
TCOF1-204ENST00000427724 LARGE1O95461 756 aa12.02□□□□□ -0.48
TCOF1-204ENST00000427724 NLRX1Q86UT6 975 aa12.02□□□□□ -0.48
TCOF1-204ENST00000427724 PNMA1Q8ND90 353 aa12.02□□□□□ -0.48
TCOF1-204ENST00000427724 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
TCOF1-204ENST00000427724 KRT79Q5XKE5 535 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 LEO1Q8WVC0 666 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-204ENST00000427724 CBX8Q9HC52 389 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 URI1O94763 535 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-204ENST00000427724 MCM7P33993 719 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 DDIT3P35638 169 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 UTP14CQ5TAP6 766 aaKnown RBP12.02□□□□□ -0.49
TCOF1-204ENST00000427724 CNNM3Q8NE01 707 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 TSPYL1Q9H0U9 437 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 PAXBP1Q9Y5B6 917 aa12.02□□□□□ -0.49
TCOF1-204ENST00000427724 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 HSP90AA4PQ58FG1 418 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 PLIN2Q99541 437 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 TMX1Q9H3N1 280 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 CCP110O43303 1012 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 STRIP1Q5VSL9 837 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 STXBP4Q6ZWJ1 553 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 CCDC150Q8NCX0 1101 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 TMEM87BQ96K49 555 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 TRIM6Q9C030 488 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-204ENST00000427724 MMRN2Q9H8L6 949 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 KIAA1210Q9ULL0 1709 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 CAVIN2O95810 425 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 USP8P40818 1118 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
TCOF1-204ENST00000427724 SF3B3Q15393 1217 aaKnown RBP12.01□□□□□ -0.49
TCOF1-204ENST00000427724 ENOX2Q16206 610 aaKnown RBP12.01□□□□□ -0.49
TCOF1-204ENST00000427724 CLEC17AQ6ZS10 378 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
TCOF1-204ENST00000427724 ZC3H13Q5T200 1668 aaKnown RBP12.01□□□□□ -0.49
TCOF1-204ENST00000427724 CBFA2T2O43439 604 aa12□□□□□ -0.49
TCOF1-204ENST00000427724 PHACTR2O75167 634 aa12□□□□□ -0.49
TCOF1-204ENST00000427724 SRGNP10124 158 aa12□□□□□ -0.49
TCOF1-204ENST00000427724 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
TCOF1-204ENST00000427724 FBXO11Q86XK2 927 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms