RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 TFAP4Q01664 338 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 ICA1Q05084 483 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 WDR18Q9BV38 432 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 DSCC1Q9BVC3 393 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 CENPFP49454 3210 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 A0A1W2PRG0 241 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 HSPA8P11142 646 aaKnown RBP14.88□□□□□ -0.03
SMIM12-203ENST00000426886 FASTKD5Q7L8L6 764 aaKnown RBP14.88□□□□□ -0.03
SMIM12-203ENST00000426886 ESYT1Q9BSJ8 1104 aa14.88□□□□□ -0.03
SMIM12-203ENST00000426886 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMIM12-203ENST00000426886 CA12O43570 354 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 ALDH1A1P00352 501 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 DEKP35659 375 aaKnown RBP14.87□□□□□ -0.03
SMIM12-203ENST00000426886 GPAT2Q6NUI2 795 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 KIAA1211Q6ZU35 1233 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 TBC1D10CQ8IV04 446 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 ANO2Q9NQ90 1003 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 TMOD4Q9NZQ9 345 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 RAD50Q92878 1312 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 ROBO3Q96MS0 1386 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 DOCK1Q14185 1865 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 CDC45O75419 566 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 SIAH1Q8IUQ4 282 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 SPICE1Q8N0Z3 855 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 NBPF3Q9H094 633 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
SMIM12-203ENST00000426886 EEF2P13639 858 aaKnown RBP14.86□□□□□ -0.03
SMIM12-203ENST00000426886 CASC1Q6TDU7 716 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 MFSD6Q6ZSS7 791 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 NMT2O60551 498 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 IMMTQ16891 758 aaKnown RBP14.86□□□□□ -0.03
SMIM12-203ENST00000426886 NKX2-3Q8TAU0 364 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 CTNNA3Q9UI47 895 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 ANAPC4Q9UJX5 808 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 THSD7BQ9C0I4 1608 aa14.86□□□□□ -0.03
SMIM12-203ENST00000426886 AKNAD1Q5T1N1 836 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
SMIM12-203ENST00000426886 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 CEP95Q96GE4 821 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 TBC1D2Q9BYX2 928 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 ZFYVE28Q9HCC9 887 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 CLIP2Q9UDT6 1046 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMIM12-203ENST00000426886 C19orf81C9J6K1 198 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 CPA4Q9UI42 421 aa14.85□□□□□ -0.03
SMIM12-203ENST00000426886 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 MTMR7Q9Y216 660 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 ZMYM6O95789 1325 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 GPR25O00155 361 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 SH3D19Q5HYK7 790 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 USP17L2Q6R6M4 530 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 PROCA1Q8NCQ7 364 aaPredicted RBP14.84□□□□□ -0.03
SMIM12-203ENST00000426886 SMCR8Q8TEV9 937 aaPredicted RBP14.84□□□□□ -0.03
SMIM12-203ENST00000426886 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
SMIM12-203ENST00000426886 STX8Q9UNK0 236 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 TAF6LQ9Y6J9 622 aa14.84□□□□□ -0.03
SMIM12-203ENST00000426886 NEDD4P46934 1319 aa14.83□□□□□ -0.03
SMIM12-203ENST00000426886 ZKSCAN3Q9BRR0 538 aa14.83□□□□□ -0.03
SMIM12-203ENST00000426886 KIAA1683Q9H0B3 1180 aa14.83□□□□□ -0.03
SMIM12-203ENST00000426886 TAOK2Q9UL54 1235 aa14.83□□□□□ -0.03
SMIM12-203ENST00000426886 RBM8AQ9Y5S9 174 aaKnown RBP14.83□□□□□ -0.03
SMIM12-203ENST00000426886 PEX10O60683 326 aa14.83□□□□□ -0.04
SMIM12-203ENST00000426886 CYP21A2P08686 494 aa14.83□□□□□ -0.04
SMIM12-203ENST00000426886 LRRC47Q8N1G4 583 aaKnown RBP14.83□□□□□ -0.04
SMIM12-203ENST00000426886 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
SMIM12-203ENST00000426886 STAG1Q8WVM7 1258 aa14.83□□□□□ -0.04
SMIM12-203ENST00000426886 MAP4K1Q92918 833 aa14.83□□□□□ -0.04
SMIM12-203ENST00000426886 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
SMIM12-203ENST00000426886 B4E1Z4 1266 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 VCAM1P19320 739 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 USP14P54578 494 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 COL13A1Q5TAT6 717 aaPredicted RBP14.82□□□□□ -0.04
SMIM12-203ENST00000426886 RNF41Q9H4P4 317 aaPredicted RBP14.82□□□□□ -0.04
SMIM12-203ENST00000426886 IL17RBQ9NRM6 502 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 MTMR4Q9NYA4 1195 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 TMX2Q9Y320 296 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
SMIM12-203ENST00000426886 TLR2O60603 784 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 KDM4AO75164 1064 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
SMIM12-203ENST00000426886 PARK7Q99497 189 aaKnown RBP14.82□□□□□ -0.04
SMIM12-203ENST00000426886 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
SMIM12-203ENST00000426886 PHIPQ8WWQ0 1821 aa14.82□□□□□ -0.04
SMIM12-203ENST00000426886 ORC4O43929 436 aa14.81□□□□□ -0.04
SMIM12-203ENST00000426886 P2RX7Q99572 595 aaKnown RBP14.81□□□□□ -0.04
SMIM12-203ENST00000426886 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
SMIM12-203ENST00000426886 ISY1Q9ULR0 285 aaKnown RBP14.81□□□□□ -0.04
SMIM12-203ENST00000426886 TTLL1O95922 423 aa14.81□□□□□ -0.04
SMIM12-203ENST00000426886 FGRP09769 529 aa14.81□□□□□ -0.04
SMIM12-203ENST00000426886 NUP88Q99567 741 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms