RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 CCDC173Q0VFZ6 552 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 NEXNQ0ZGT2 675 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TFCP2Q12800 502 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PTK7Q13308 1070 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 ME3Q16798 604 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TNNI3KQ59H18 835 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 VPS53Q5VIR6 699 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 C9orf131Q5VYM1 1079 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 LRSAM1Q6UWE0 723 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TTLL7Q6ZT98 887 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 KIAA1211Q6ZU35 1233 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TOM1L2Q6ZVM7 507 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TAS1R3Q7RTX0 852 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 ATG9AQ7Z3C6 839 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 UBE3BQ7Z3V4 1068 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 OGFOD1Q8N543 542 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 RETREG2Q8NC44 543 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PLBD2Q8NHP8 589 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TPCN2Q8NHX9 752 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 DDX54Q8TDD1 881 aaKnown RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 STK32AQ8WU08 396 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 EDC3Q96F86 508 aaKnown RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PDLIM2Q96JY6 352 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 JAKMIP1Q96N16 626 aaKnown RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 SLC4A9Q96Q91 983 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 ZSCAN10Q96SZ4 725 aaPredicted RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 GAS2L1Q99501 681 aaPredicted RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 FSD1Q9BTV5 496 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 SIL1Q9H173 461 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 TIMMDC1Q9NPL8 285 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PDRG1Q9NUG6 133 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 HCN2Q9UL51 889 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 IQSEC3Q9UPP2 1182 aaPredicted RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 LIMCH1Q9UPQ0 1083 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 MTMR6Q9Y217 621 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 NOD1Q9Y239 953 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 USP3Q9Y6I4 520 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 FPGT-TNNI3KV9GXZ4 949 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PALLDQ8WX93 1383 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SH3TC1Q8TE82 1336 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 A0A087WZG4 1122 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SYCE3A1L190 88 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 FAM196BA6NMK8 535 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ERVV-2B6SEH9 535 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 STX6O43752 255 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 DTNBO60941 627 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 PTCD1O75127 700 aaKnown RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 TAF5LO75529 589 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 DKK1O94907 266 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ATG7O95352 703 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 F13A1P00488 732 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 CHGBP05060 677 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 NCLP19338 710 aaKnown RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 RPS6KB1P23443 525 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 MSX1P28360 303 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 GJB2P29033 226 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SMTNP53814 917 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 TOB2Q14106 344 aaPredicted RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 MTFR1Q15390 333 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 USPL1Q5W0Q7 1092 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 LYPD4Q6UWN0 246 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 CCDC129Q6ZRS4 1044 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 RIPOR1Q6ZS17 1223 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ARHGAP27Q6ZUM4 889 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 USP48Q86UV5 1035 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 CCDC83Q8IWF9 413 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 TTC5Q8N0Z6 440 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 NECAB1Q8N987 351 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 GTPBP3Q969Y2 492 aaKnown RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 GMCL1Q96IK5 515 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ZSCAN31Q96LW9 406 aaPredicted RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 HAUS7Q99871 368 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 DBNDD2Q9BQY9 259 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ISCA1Q9BUE6 129 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 CARD10Q9BWT7 1032 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ALDH8A1Q9H2A2 487 aaPredicted RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 VRTNQ9H8Y1 702 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SH2B1Q9NRF2 756 aaPredicted RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 DNAAF2Q9NVR5 837 aaKnown RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SERTAD1Q9UHV2 236 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 TPCN1Q9ULQ1 816 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 NOVA2Q9UNW9 492 aaKnown RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SMC3Q9UQE7 1217 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 CNPY2Q9Y2B0 182 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.25□□□□□ -1.89
LINC00407-201ENST00000426509 CYP46A1Q9Y6A2 500 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 PCNTO95613 3336 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 RIC1Q4ADV7 1423 aa3.25□□□□□ -1.89
LINC00407-201ENST00000426509 SPEF2Q9C093 1822 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 CICQ96RK0 1608 aaPredicted RBP3.24□□□□□ -1.89
LINC00407-201ENST00000426509 A0A0G2JLW4 131 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 A6NJY4 79 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 EXOC5O00471 708 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 CDK2AP1O14519 115 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 FIBPO43427 364 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 LZTS3O60299 673 aaPredicted RBP3.24□□□□□ -1.89
LINC00407-201ENST00000426509 LGR5O75473 907 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 A1BGP04217 495 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 IL2RBP14784 551 aa3.24□□□□□ -1.89
LINC00407-201ENST00000426509 CTCFP49711 727 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms